RNA–Protein interactions for RNA: ENST00000454757.6

EGFR-206, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-206ENST00000454757 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
EGFR-206ENST00000454757 SUPT5HO00267 1087 aaKnown RBP23.98■■□□□ 1.43
EGFR-206ENST00000454757 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
EGFR-206ENST00000454757 NISCHQ9Y2I1 1504 aa23.61■■□□□ 1.37
EGFR-206ENST00000454757 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
EGFR-206ENST00000454757 APLP2Q06481 763 aa23.41■■□□□ 1.34
EGFR-206ENST00000454757 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
EGFR-206ENST00000454757 PELP1Q8IZL8 1130 aaKnown RBP22.98■■□□□ 1.27
EGFR-206ENST00000454757 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
EGFR-206ENST00000454757 RANGAP1P46060 587 aaPredicted RBP22.57■■□□□ 1.2
EGFR-206ENST00000454757 TTBK1Q5TCY1 1321 aaPredicted RBP22.51■■□□□ 1.19
EGFR-206ENST00000454757 TRIM41Q8WV44 630 aa22.3■■□□□ 1.16
EGFR-206ENST00000454757 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
EGFR-206ENST00000454757 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
EGFR-206ENST00000454757 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.14
EGFR-206ENST00000454757 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
EGFR-206ENST00000454757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
EGFR-206ENST00000454757 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
EGFR-206ENST00000454757 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
EGFR-206ENST00000454757 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
EGFR-206ENST00000454757 CENPBP07199 599 aaPredicted RBP21.79■■□□□ 1.08
EGFR-206ENST00000454757 NEFLP07196 543 aa21.71■■□□□ 1.07
EGFR-206ENST00000454757 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
EGFR-206ENST00000454757 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
EGFR-206ENST00000454757 ITGAEP38570 1179 aa21.49■■□□□ 1.03
EGFR-206ENST00000454757 HRCP23327 699 aa21.43■■□□□ 1.02
EGFR-206ENST00000454757 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
EGFR-206ENST00000454757 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1.01
EGFR-206ENST00000454757 DAXXQ9UER7 740 aaPredicted RBP21.25■□□□□ 0.99
EGFR-206ENST00000454757 YTHDC1Q96MU7 727 aaKnown RBP21.24■□□□□ 0.99
EGFR-206ENST00000454757 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.98
EGFR-206ENST00000454757 FBLN2P98095 1184 aa21.16■□□□□ 0.98
EGFR-206ENST00000454757 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
EGFR-206ENST00000454757 ABCC9O60706 1549 aa21.13■□□□□ 0.97
EGFR-206ENST00000454757 TRIM26Q12899 539 aaPredicted RBP21.09■□□□□ 0.97
EGFR-206ENST00000454757 TRIM52Q96A61 297 aa21■□□□□ 0.95
EGFR-206ENST00000454757 MYT1Q01538 1121 aa20.99■□□□□ 0.95
EGFR-206ENST00000454757 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
EGFR-206ENST00000454757 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
EGFR-206ENST00000454757 BCANQ96GW7 911 aa20.95■□□□□ 0.94
EGFR-206ENST00000454757 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
EGFR-206ENST00000454757 CLSPNQ9HAW4 1339 aa20.87■□□□□ 0.93
EGFR-206ENST00000454757 ZBTB47Q9UFB7 747 aaPredicted RBP20.77■□□□□ 0.91
EGFR-206ENST00000454757 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
EGFR-206ENST00000454757 NEFMP07197 916 aa20.73■□□□□ 0.91
EGFR-206ENST00000454757 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
EGFR-206ENST00000454757 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
EGFR-206ENST00000454757 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
EGFR-206ENST00000454757 CDK11AQ9UQ88 783 aaPredicted RBP20.64■□□□□ 0.89
EGFR-206ENST00000454757 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
EGFR-206ENST00000454757 STAG3Q9UJ98 1225 aa20.58■□□□□ 0.88
EGFR-206ENST00000454757 ARID3CA6NKF2 412 aa20.55■□□□□ 0.88
EGFR-206ENST00000454757 ZNF777Q9ULD5 760 aaPredicted RBP20.54■□□□□ 0.88
EGFR-206ENST00000454757 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
EGFR-206ENST00000454757 P3H3Q8IVL6 736 aa20.47■□□□□ 0.87
EGFR-206ENST00000454757 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
EGFR-206ENST00000454757 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
EGFR-206ENST00000454757 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
EGFR-206ENST00000454757 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
EGFR-206ENST00000454757 ANP32CO43423 234 aa20.37■□□□□ 0.85
EGFR-206ENST00000454757 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
EGFR-206ENST00000454757 GTF3C3Q9Y5Q9 886 aa20.32■□□□□ 0.84
EGFR-206ENST00000454757 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
EGFR-206ENST00000454757 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
EGFR-206ENST00000454757 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
EGFR-206ENST00000454757 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
EGFR-206ENST00000454757 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
EGFR-206ENST00000454757 TSPY4P0CV99 314 aa20.08■□□□□ 0.8
EGFR-206ENST00000454757 TSPY10P0CW01 314 aa20.08■□□□□ 0.8
EGFR-206ENST00000454757 A0A0G2JS52 829 aa20.07■□□□□ 0.8
EGFR-206ENST00000454757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.8
EGFR-206ENST00000454757 SCRIBQ14160 1630 aa20.03■□□□□ 0.8
EGFR-206ENST00000454757 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
EGFR-206ENST00000454757 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
EGFR-206ENST00000454757 TONSLQ96HA7 1378 aa19.95■□□□□ 0.78
EGFR-206ENST00000454757 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
EGFR-206ENST00000454757 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
EGFR-206ENST00000454757 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
EGFR-206ENST00000454757 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
EGFR-206ENST00000454757 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
EGFR-206ENST00000454757 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
EGFR-206ENST00000454757 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
EGFR-206ENST00000454757 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
EGFR-206ENST00000454757 PLEKHD1A6NEE1 506 aa19.8■□□□□ 0.76
EGFR-206ENST00000454757 PLEKHG5O94827 1062 aa19.8■□□□□ 0.76
EGFR-206ENST00000454757 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
EGFR-206ENST00000454757 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
EGFR-206ENST00000454757 WDR43Q15061 677 aaKnown RBP eCLIP19.76■□□□□ 0.75
EGFR-206ENST00000454757 KDM2AQ9Y2K7 1162 aa19.74■□□□□ 0.75
EGFR-206ENST00000454757 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
EGFR-206ENST00000454757 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
EGFR-206ENST00000454757 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.71■□□□□ 0.75
EGFR-206ENST00000454757 ANP32BQ92688 251 aaKnown RBP19.7■□□□□ 0.74
EGFR-206ENST00000454757 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
EGFR-206ENST00000454757 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
EGFR-206ENST00000454757 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
EGFR-206ENST00000454757 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
EGFR-206ENST00000454757 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
EGFR-206ENST00000454757 CDK11BP21127 795 aaKnown RBP19.62■□□□□ 0.73
EGFR-206ENST00000454757 FAM9BQ8IZU0 186 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms