RNA–Protein interactions for RNA: ENST00000262646.11

RAB2A-201, Transcript of RAB2A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB2A, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB2A-201ENST00000262646 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
RAB2A-201ENST00000262646 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
RAB2A-201ENST00000262646 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
RAB2A-201ENST00000262646 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
RAB2A-201ENST00000262646 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
RAB2A-201ENST00000262646 HRCP23327 699 aa24.49■■□□□ 1.51
RAB2A-201ENST00000262646 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
RAB2A-201ENST00000262646 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
RAB2A-201ENST00000262646 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
RAB2A-201ENST00000262646 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
RAB2A-201ENST00000262646 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
RAB2A-201ENST00000262646 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
RAB2A-201ENST00000262646 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
RAB2A-201ENST00000262646 SCAF1Q9H7N4 1312 aaKnown RBP23.29■■□□□ 1.32
RAB2A-201ENST00000262646 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
RAB2A-201ENST00000262646 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
RAB2A-201ENST00000262646 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
RAB2A-201ENST00000262646 ZEB1P37275 1124 aaPredicted RBP23.09■■□□□ 1.29
RAB2A-201ENST00000262646 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
RAB2A-201ENST00000262646 MYT1Q01538 1121 aa22.85■■□□□ 1.25
RAB2A-201ENST00000262646 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
RAB2A-201ENST00000262646 CENPBP07199 599 aaPredicted RBP22.79■■□□□ 1.24
RAB2A-201ENST00000262646 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
RAB2A-201ENST00000262646 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
RAB2A-201ENST00000262646 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
RAB2A-201ENST00000262646 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
RAB2A-201ENST00000262646 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
RAB2A-201ENST00000262646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
RAB2A-201ENST00000262646 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
RAB2A-201ENST00000262646 DIEXFQ68CQ4 756 aaKnown RBP22.54■■□□□ 1.2
RAB2A-201ENST00000262646 RANGAP1P46060 587 aaPredicted RBP22.5■■□□□ 1.19
RAB2A-201ENST00000262646 SCRIBQ14160 1630 aa22.33■■□□□ 1.17
RAB2A-201ENST00000262646 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
RAB2A-201ENST00000262646 ABCC9O60706 1549 aa22.13■■□□□ 1.13
RAB2A-201ENST00000262646 RB1CC1Q8TDY2 1594 aa22.05■■□□□ 1.12
RAB2A-201ENST00000262646 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
RAB2A-201ENST00000262646 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
RAB2A-201ENST00000262646 ZNF316A6NFI3 1004 aaPredicted RBP21.93■■□□□ 1.1
RAB2A-201ENST00000262646 MIER1Q8N108 512 aa21.88■■□□□ 1.09
RAB2A-201ENST00000262646 HNRNPUL2Q1KMD3 747 aaKnown RBP21.83■■□□□ 1.09
RAB2A-201ENST00000262646 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
RAB2A-201ENST00000262646 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
RAB2A-201ENST00000262646 BCANQ96GW7 911 aa21.7■■□□□ 1.06
RAB2A-201ENST00000262646 WIZO95785 1651 aa21.66■■□□□ 1.06
RAB2A-201ENST00000262646 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
RAB2A-201ENST00000262646 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
RAB2A-201ENST00000262646 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
RAB2A-201ENST00000262646 APLP2Q06481 763 aa21.49■■□□□ 1.03
RAB2A-201ENST00000262646 NACADO15069 1562 aa21.47■■□□□ 1.03
RAB2A-201ENST00000262646 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
RAB2A-201ENST00000262646 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
RAB2A-201ENST00000262646 ITGAEP38570 1179 aa21.4■■□□□ 1.02
RAB2A-201ENST00000262646 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
RAB2A-201ENST00000262646 TSHZ2Q9NRE2 1034 aa21.35■■□□□ 1.01
RAB2A-201ENST00000262646 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
RAB2A-201ENST00000262646 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
RAB2A-201ENST00000262646 NEFLP07196 543 aa21.29■■□□□ 1
RAB2A-201ENST00000262646 SOGA1O94964 1423 aa21.26■□□□□ 0.99
RAB2A-201ENST00000262646 FKBP8Q14318 412 aa21.25■□□□□ 0.99
RAB2A-201ENST00000262646 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
RAB2A-201ENST00000262646 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
RAB2A-201ENST00000262646 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
RAB2A-201ENST00000262646 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
RAB2A-201ENST00000262646 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
RAB2A-201ENST00000262646 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
RAB2A-201ENST00000262646 CLSPNQ9HAW4 1339 aa21.06■□□□□ 0.96
RAB2A-201ENST00000262646 SMARCA2P51531 1590 aa21.06■□□□□ 0.96
RAB2A-201ENST00000262646 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
RAB2A-201ENST00000262646 TRIM52Q96A61 297 aa21■□□□□ 0.95
RAB2A-201ENST00000262646 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
RAB2A-201ENST00000262646 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
RAB2A-201ENST00000262646 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
RAB2A-201ENST00000262646 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
RAB2A-201ENST00000262646 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
RAB2A-201ENST00000262646 IRX6P78412 446 aaPredicted RBP20.89■□□□□ 0.93
RAB2A-201ENST00000262646 HIRIP3Q9BW71 556 aaPredicted RBP20.88■□□□□ 0.93
RAB2A-201ENST00000262646 TNIKQ9UKE5 1360 aa20.87■□□□□ 0.93
RAB2A-201ENST00000262646 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
RAB2A-201ENST00000262646 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
RAB2A-201ENST00000262646 CDK11AQ9UQ88 783 aaPredicted RBP20.78■□□□□ 0.92
RAB2A-201ENST00000262646 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
RAB2A-201ENST00000262646 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
RAB2A-201ENST00000262646 NBR1Q14596 966 aa20.73■□□□□ 0.91
RAB2A-201ENST00000262646 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
RAB2A-201ENST00000262646 ANP32CO43423 234 aa20.68■□□□□ 0.9
RAB2A-201ENST00000262646 CLIP1P30622 1438 aa20.66■□□□□ 0.9
RAB2A-201ENST00000262646 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
RAB2A-201ENST00000262646 EEA1Q15075 1411 aa20.62■□□□□ 0.89
RAB2A-201ENST00000262646 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
RAB2A-201ENST00000262646 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
RAB2A-201ENST00000262646 MSH5O43196 834 aa20.59■□□□□ 0.89
RAB2A-201ENST00000262646 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
RAB2A-201ENST00000262646 PRKCSHP14314 528 aaPredicted RBP20.58■□□□□ 0.88
RAB2A-201ENST00000262646 DEKP35659 375 aaKnown RBP20.58■□□□□ 0.88
RAB2A-201ENST00000262646 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
RAB2A-201ENST00000262646 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
RAB2A-201ENST00000262646 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.87
RAB2A-201ENST00000262646 DHX57Q6P158 1386 aaKnown RBP20.51■□□□□ 0.87
RAB2A-201ENST00000262646 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
RAB2A-201ENST00000262646 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms