RNA–Protein interactions for RNA: ENST00000216277.12

PAPOLA-201, Transcript of poly(A) polymerase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAPOLA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-201ENST00000216277 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
PAPOLA-201ENST00000216277 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
PAPOLA-201ENST00000216277 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.48
PAPOLA-201ENST00000216277 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
PAPOLA-201ENST00000216277 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
PAPOLA-201ENST00000216277 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
PAPOLA-201ENST00000216277 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
PAPOLA-201ENST00000216277 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
PAPOLA-201ENST00000216277 APLP2Q06481 763 aa22.62■■□□□ 1.21
PAPOLA-201ENST00000216277 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
PAPOLA-201ENST00000216277 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
PAPOLA-201ENST00000216277 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
PAPOLA-201ENST00000216277 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
PAPOLA-201ENST00000216277 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
PAPOLA-201ENST00000216277 CENPBP07199 599 aaPredicted RBP22.14■■□□□ 1.13
PAPOLA-201ENST00000216277 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
PAPOLA-201ENST00000216277 PPARGC1BQ86YN6 1023 aaKnown RBP22.03■■□□□ 1.12
PAPOLA-201ENST00000216277 HRCP23327 699 aa21.92■■□□□ 1.1
PAPOLA-201ENST00000216277 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
PAPOLA-201ENST00000216277 LOC105371045A0A1W2PR82 267 aa21.9■■□□□ 1.1
PAPOLA-201ENST00000216277 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
PAPOLA-201ENST00000216277 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
PAPOLA-201ENST00000216277 YTHDC1Q96MU7 727 aaKnown RBP21.82■■□□□ 1.08
PAPOLA-201ENST00000216277 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.04
PAPOLA-201ENST00000216277 NEFLP07196 543 aa21.48■■□□□ 1.03
PAPOLA-201ENST00000216277 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
PAPOLA-201ENST00000216277 ITGAEP38570 1179 aa21.4■■□□□ 1.02
PAPOLA-201ENST00000216277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1.01
PAPOLA-201ENST00000216277 MYT1Q01538 1121 aa21.17■□□□□ 0.98
PAPOLA-201ENST00000216277 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
PAPOLA-201ENST00000216277 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
PAPOLA-201ENST00000216277 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
PAPOLA-201ENST00000216277 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
PAPOLA-201ENST00000216277 ABCC9O60706 1549 aa20.83■□□□□ 0.93
PAPOLA-201ENST00000216277 GTF3C3Q9Y5Q9 886 aa20.81■□□□□ 0.92
PAPOLA-201ENST00000216277 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
PAPOLA-201ENST00000216277 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
PAPOLA-201ENST00000216277 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
PAPOLA-201ENST00000216277 DAXXQ9UER7 740 aaPredicted RBP20.66■□□□□ 0.9
PAPOLA-201ENST00000216277 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
PAPOLA-201ENST00000216277 BCANQ96GW7 911 aa20.62■□□□□ 0.89
PAPOLA-201ENST00000216277 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
PAPOLA-201ENST00000216277 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
PAPOLA-201ENST00000216277 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
PAPOLA-201ENST00000216277 ANP32CO43423 234 aa20.46■□□□□ 0.87
PAPOLA-201ENST00000216277 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
PAPOLA-201ENST00000216277 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
PAPOLA-201ENST00000216277 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
PAPOLA-201ENST00000216277 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
PAPOLA-201ENST00000216277 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
PAPOLA-201ENST00000216277 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
PAPOLA-201ENST00000216277 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
PAPOLA-201ENST00000216277 CDK11AQ9UQ88 783 aaPredicted RBP20.25■□□□□ 0.83
PAPOLA-201ENST00000216277 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
PAPOLA-201ENST00000216277 FBLN2P98095 1184 aa20.18■□□□□ 0.82
PAPOLA-201ENST00000216277 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
PAPOLA-201ENST00000216277 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
PAPOLA-201ENST00000216277 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
PAPOLA-201ENST00000216277 FKBP8Q14318 412 aa20.08■□□□□ 0.8
PAPOLA-201ENST00000216277 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
PAPOLA-201ENST00000216277 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
PAPOLA-201ENST00000216277 TONSLQ96HA7 1378 aa20■□□□□ 0.79
PAPOLA-201ENST00000216277 MIER1Q8N108 512 aa20■□□□□ 0.79
PAPOLA-201ENST00000216277 HNRNPUQ00839 825 aaKnown RBP eCLIP19.98■□□□□ 0.79
PAPOLA-201ENST00000216277 FAM9BQ8IZU0 186 aa19.9■□□□□ 0.78
PAPOLA-201ENST00000216277 RSF1Q96T23 1441 aaPredicted RBP19.88■□□□□ 0.77
PAPOLA-201ENST00000216277 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
PAPOLA-201ENST00000216277 ANP32AP39687 249 aaKnown RBP19.87■□□□□ 0.77
PAPOLA-201ENST00000216277 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
PAPOLA-201ENST00000216277 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
PAPOLA-201ENST00000216277 CLIP1P30622 1438 aa19.85■□□□□ 0.77
PAPOLA-201ENST00000216277 NPM2Q86SE8 214 aaKnown RBP19.85■□□□□ 0.77
PAPOLA-201ENST00000216277 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
PAPOLA-201ENST00000216277 SALL2Q9Y467 1007 aaPredicted RBP19.79■□□□□ 0.76
PAPOLA-201ENST00000216277 CEP162Q5TB80 1403 aa19.77■□□□□ 0.76
PAPOLA-201ENST00000216277 ZBTB47Q9UFB7 747 aaPredicted RBP19.76■□□□□ 0.75
PAPOLA-201ENST00000216277 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
PAPOLA-201ENST00000216277 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
PAPOLA-201ENST00000216277 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
PAPOLA-201ENST00000216277 MTUS2Q5JR59 1369 aa19.69■□□□□ 0.74
PAPOLA-201ENST00000216277 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
PAPOLA-201ENST00000216277 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
PAPOLA-201ENST00000216277 NEFMP07197 916 aa19.66■□□□□ 0.74
PAPOLA-201ENST00000216277 EEA1Q15075 1411 aa19.63■□□□□ 0.73
PAPOLA-201ENST00000216277 GOLGA3Q08378 1498 aa19.63■□□□□ 0.73
PAPOLA-201ENST00000216277 SLC24A1O60721 1099 aa19.62■□□□□ 0.73
PAPOLA-201ENST00000216277 KDM2AQ9Y2K7 1162 aa19.62■□□□□ 0.73
PAPOLA-201ENST00000216277 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
PAPOLA-201ENST00000216277 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
PAPOLA-201ENST00000216277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■□□□□ 9.1
PAPOLA-201ENST00000216277 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
PAPOLA-201ENST00000216277 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.72
PAPOLA-201ENST00000216277 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.72
PAPOLA-201ENST00000216277 TSPY4P0CV99 314 aa19.55■□□□□ 0.72
PAPOLA-201ENST00000216277 TSPY10P0CW01 314 aa19.55■□□□□ 0.72
PAPOLA-201ENST00000216277 NBR1Q14596 966 aa19.54■□□□□ 0.72
PAPOLA-201ENST00000216277 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
PAPOLA-201ENST00000216277 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
PAPOLA-201ENST00000216277 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
PAPOLA-201ENST00000216277 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms