RNA–Protein interactions for RNA: ENST00000638386.1

SPIN3-207, Transcript of spindlin family member 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPIN3, Length 4,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-207ENST00000638386 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
SPIN3-207ENST00000638386 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
SPIN3-207ENST00000638386 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
SPIN3-207ENST00000638386 SUPT5HO00267 1087 aaKnown RBP24.76■■□□□ 1.56
SPIN3-207ENST00000638386 ABCC9O60706 1549 aa23.61■■□□□ 1.37
SPIN3-207ENST00000638386 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
SPIN3-207ENST00000638386 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
SPIN3-207ENST00000638386 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
SPIN3-207ENST00000638386 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
SPIN3-207ENST00000638386 APLP2Q06481 763 aa23.05■■□□□ 1.28
SPIN3-207ENST00000638386 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
SPIN3-207ENST00000638386 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
SPIN3-207ENST00000638386 ATP1B4Q9UN42 357 aaPredicted RBP22.65■■□□□ 1.22
SPIN3-207ENST00000638386 TTBK1Q5TCY1 1321 aaPredicted RBP22.61■■□□□ 1.21
SPIN3-207ENST00000638386 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
SPIN3-207ENST00000638386 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
SPIN3-207ENST00000638386 SCRIBQ14160 1630 aa22.27■■□□□ 1.16
SPIN3-207ENST00000638386 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
SPIN3-207ENST00000638386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
SPIN3-207ENST00000638386 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
SPIN3-207ENST00000638386 RB1CC1Q8TDY2 1594 aa22.09■■□□□ 1.13
SPIN3-207ENST00000638386 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
SPIN3-207ENST00000638386 PPARGC1BQ86YN6 1023 aaKnown RBP21.93■■□□□ 1.1
SPIN3-207ENST00000638386 FBLN2P98095 1184 aa21.92■■□□□ 1.1
SPIN3-207ENST00000638386 LOC105371045A0A1W2PR82 267 aa21.91■■□□□ 1.1
SPIN3-207ENST00000638386 NACADO15069 1562 aa21.9■■□□□ 1.1
SPIN3-207ENST00000638386 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.1
SPIN3-207ENST00000638386 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.08
SPIN3-207ENST00000638386 ITGAEP38570 1179 aa21.7■■□□□ 1.07
SPIN3-207ENST00000638386 CSRNP3Q8WYN3 585 aa21.51■■□□□ 1.03
SPIN3-207ENST00000638386 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
SPIN3-207ENST00000638386 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.03
SPIN3-207ENST00000638386 TRIM26Q12899 539 aaPredicted RBP21.44■■□□□ 1.02
SPIN3-207ENST00000638386 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
SPIN3-207ENST00000638386 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
SPIN3-207ENST00000638386 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
SPIN3-207ENST00000638386 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1.01
SPIN3-207ENST00000638386 ARID3CA6NKF2 412 aa21.32■■□□□ 1
SPIN3-207ENST00000638386 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
SPIN3-207ENST00000638386 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-207ENST00000638386 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-207ENST00000638386 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
SPIN3-207ENST00000638386 CDK11AQ9UQ88 783 aaPredicted RBP21.15■□□□□ 0.98
SPIN3-207ENST00000638386 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
SPIN3-207ENST00000638386 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
SPIN3-207ENST00000638386 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
SPIN3-207ENST00000638386 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
SPIN3-207ENST00000638386 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
SPIN3-207ENST00000638386 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
SPIN3-207ENST00000638386 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
SPIN3-207ENST00000638386 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
SPIN3-207ENST00000638386 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
SPIN3-207ENST00000638386 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
SPIN3-207ENST00000638386 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
SPIN3-207ENST00000638386 ESF1Q9H501 851 aaKnown RBP20.8■□□□□ 0.92
SPIN3-207ENST00000638386 NEUROD1Q13562 356 aa20.79■□□□□ 0.92
SPIN3-207ENST00000638386 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
SPIN3-207ENST00000638386 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
SPIN3-207ENST00000638386 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
SPIN3-207ENST00000638386 EEA1Q15075 1411 aa20.74■□□□□ 0.91
SPIN3-207ENST00000638386 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
SPIN3-207ENST00000638386 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
SPIN3-207ENST00000638386 KCNH8Q96L42 1107 aa20.68■□□□□ 0.9
SPIN3-207ENST00000638386 BCANQ96GW7 911 aa20.68■□□□□ 0.9
SPIN3-207ENST00000638386 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
SPIN3-207ENST00000638386 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
SPIN3-207ENST00000638386 CLIP1P30622 1438 aa20.65■□□□□ 0.9
SPIN3-207ENST00000638386 CADPSQ9ULU8 1353 aa20.64■□□□□ 0.89
SPIN3-207ENST00000638386 HRCP23327 699 aa20.64■□□□□ 0.89
SPIN3-207ENST00000638386 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
SPIN3-207ENST00000638386 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
SPIN3-207ENST00000638386 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
SPIN3-207ENST00000638386 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
SPIN3-207ENST00000638386 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
SPIN3-207ENST00000638386 CUX2O14529 1486 aa20.6■□□□□ 0.89
SPIN3-207ENST00000638386 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
SPIN3-207ENST00000638386 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
SPIN3-207ENST00000638386 STAG3Q9UJ98 1225 aa20.53■□□□□ 0.88
SPIN3-207ENST00000638386 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
SPIN3-207ENST00000638386 CARMIL1Q5VZK9 1371 aa20.53■□□□□ 0.88
SPIN3-207ENST00000638386 CHGAP10645 457 aaKnown RBP20.53■□□□□ 0.88
SPIN3-207ENST00000638386 WIZO95785 1651 aa20.51■□□□□ 0.87
SPIN3-207ENST00000638386 SOGA1O94964 1423 aa20.51■□□□□ 0.87
SPIN3-207ENST00000638386 NEFLP07196 543 aa20.5■□□□□ 0.87
SPIN3-207ENST00000638386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
SPIN3-207ENST00000638386 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
SPIN3-207ENST00000638386 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
SPIN3-207ENST00000638386 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
SPIN3-207ENST00000638386 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
SPIN3-207ENST00000638386 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
SPIN3-207ENST00000638386 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
SPIN3-207ENST00000638386 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
SPIN3-207ENST00000638386 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
SPIN3-207ENST00000638386 EIF4G1Q04637 1599 aaKnown RBP20.35■□□□□ 0.85
SPIN3-207ENST00000638386 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
SPIN3-207ENST00000638386 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
SPIN3-207ENST00000638386 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
SPIN3-207ENST00000638386 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
SPIN3-207ENST00000638386 CARMIL2Q6F5E8 1435 aa20.25■□□□□ 0.83
SPIN3-207ENST00000638386 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms