RNA–Protein interactions for RNA: ENST00000545012.5

TRIM46-210, Transcript of tripartite motif containing 46, humanhuman

TSL 2 BASIC

Gene TRIM46, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-210ENST00000545012 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
TRIM46-210ENST00000545012 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
TRIM46-210ENST00000545012 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.74
TRIM46-210ENST00000545012 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
TRIM46-210ENST00000545012 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
TRIM46-210ENST00000545012 ABCC9O60706 1549 aa25.73■■□□□ 1.71
TRIM46-210ENST00000545012 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
TRIM46-210ENST00000545012 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
TRIM46-210ENST00000545012 PELP1Q8IZL8 1130 aaKnown RBP25.23■■□□□ 1.63
TRIM46-210ENST00000545012 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
TRIM46-210ENST00000545012 NACADO15069 1562 aa25.07■■□□□ 1.6
TRIM46-210ENST00000545012 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
TRIM46-210ENST00000545012 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
TRIM46-210ENST00000545012 MYT1Q01538 1121 aa24.57■■□□□ 1.52
TRIM46-210ENST00000545012 HRCP23327 699 aa24.53■■□□□ 1.52
TRIM46-210ENST00000545012 CHIC1Q5VXU3 224 aa24.45■■□□□ 1.51
TRIM46-210ENST00000545012 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRIM46-210ENST00000545012 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
TRIM46-210ENST00000545012 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
TRIM46-210ENST00000545012 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
TRIM46-210ENST00000545012 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
TRIM46-210ENST00000545012 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.43
TRIM46-210ENST00000545012 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.43
TRIM46-210ENST00000545012 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
TRIM46-210ENST00000545012 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
TRIM46-210ENST00000545012 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
TRIM46-210ENST00000545012 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
TRIM46-210ENST00000545012 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
TRIM46-210ENST00000545012 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
TRIM46-210ENST00000545012 WIZO95785 1651 aa23.59■■□□□ 1.37
TRIM46-210ENST00000545012 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
TRIM46-210ENST00000545012 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
TRIM46-210ENST00000545012 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
TRIM46-210ENST00000545012 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
TRIM46-210ENST00000545012 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
TRIM46-210ENST00000545012 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
TRIM46-210ENST00000545012 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
TRIM46-210ENST00000545012 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
TRIM46-210ENST00000545012 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
TRIM46-210ENST00000545012 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
TRIM46-210ENST00000545012 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
TRIM46-210ENST00000545012 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
TRIM46-210ENST00000545012 CCDC88BA6NC98 1476 aa23.12■■□□□ 1.29
TRIM46-210ENST00000545012 HMGXB3Q12766 1538 aa23.08■■□□□ 1.28
TRIM46-210ENST00000545012 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
TRIM46-210ENST00000545012 ACIN1Q9UKV3 1341 aaKnown RBP22.86■■□□□ 1.25
TRIM46-210ENST00000545012 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
TRIM46-210ENST00000545012 DNAJC5BQ9UF47 199 aa22.79■■□□□ 1.24
TRIM46-210ENST00000545012 PRKCSHP14314 528 aaPredicted RBP22.77■■□□□ 1.23
TRIM46-210ENST00000545012 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
TRIM46-210ENST00000545012 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
TRIM46-210ENST00000545012 SOGA1O94964 1423 aa22.65■■□□□ 1.22
TRIM46-210ENST00000545012 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
TRIM46-210ENST00000545012 ZEB1P37275 1124 aaPredicted RBP22.62■■□□□ 1.21
TRIM46-210ENST00000545012 CFTRP13569 1480 aa22.61■■□□□ 1.21
TRIM46-210ENST00000545012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
TRIM46-210ENST00000545012 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
TRIM46-210ENST00000545012 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
TRIM46-210ENST00000545012 UBTFP17480 764 aaKnown RBP22.56■■□□□ 1.2
TRIM46-210ENST00000545012 WRNQ14191 1432 aaPredicted RBP eCLIP22.55■■□□□ 1.2
TRIM46-210ENST00000545012 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
TRIM46-210ENST00000545012 NESP48681 1621 aa22.49■■□□□ 1.19
TRIM46-210ENST00000545012 EEA1Q15075 1411 aa22.48■■□□□ 1.19
TRIM46-210ENST00000545012 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
TRIM46-210ENST00000545012 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
TRIM46-210ENST00000545012 LAMC3Q9Y6N6 1575 aa22.39■■□□□ 1.18
TRIM46-210ENST00000545012 FANCD2Q9BXW9 1451 aa22.39■■□□□ 1.17
TRIM46-210ENST00000545012 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
TRIM46-210ENST00000545012 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
TRIM46-210ENST00000545012 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
TRIM46-210ENST00000545012 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
TRIM46-210ENST00000545012 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
TRIM46-210ENST00000545012 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
TRIM46-210ENST00000545012 CUX1P39880 1505 aa22.25■■□□□ 1.15
TRIM46-210ENST00000545012 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
TRIM46-210ENST00000545012 RANGAP1P46060 587 aaPredicted RBP22.21■■□□□ 1.15
TRIM46-210ENST00000545012 ERICH6Q7L0X2 663 aa22.2■■□□□ 1.14
TRIM46-210ENST00000545012 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
TRIM46-210ENST00000545012 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
TRIM46-210ENST00000545012 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 KIF21BO75037 1637 aa22.13■■□□□ 1.13
TRIM46-210ENST00000545012 CLIP1P30622 1438 aa22.11■■□□□ 1.13
TRIM46-210ENST00000545012 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
TRIM46-210ENST00000545012 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
TRIM46-210ENST00000545012 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
TRIM46-210ENST00000545012 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
TRIM46-210ENST00000545012 APLP2Q06481 763 aa22.07■■□□□ 1.12
TRIM46-210ENST00000545012 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
TRIM46-210ENST00000545012 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
TRIM46-210ENST00000545012 MRC2Q9UBG0 1479 aa22■■□□□ 1.11
TRIM46-210ENST00000545012 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
TRIM46-210ENST00000545012 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
TRIM46-210ENST00000545012 CUX2O14529 1486 aa21.97■■□□□ 1.11
TRIM46-210ENST00000545012 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
TRIM46-210ENST00000545012 VPS8Q8N3P4 1428 aa21.95■■□□□ 1.1
TRIM46-210ENST00000545012 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
TRIM46-210ENST00000545012 PRXQ9BXM0 1461 aa21.86■■□□□ 1.09
TRIM46-210ENST00000545012 YTHDC1Q96MU7 727 aaKnown RBP21.85■■□□□ 1.09
TRIM46-210ENST00000545012 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms