Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.26□□□□□ -0.13
ERFP50548 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.26□□□□□ -0.13
ERFP50548 RARRES2P9-201ENST00000565168 469 ntBASIC14.26□□□□□ -0.13
ERFP50548 AC105021.1-202ENST00000570572 669 ntBASIC14.26□□□□□ -0.13
ERFP50548 SAMD11P1-201ENST00000571429 661 ntBASIC14.26□□□□□ -0.13
ERFP50548 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.26□□□□□ -0.13
ERFP50548 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.26□□□□□ -0.13
ERFP50548 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.26□□□□□ -0.13
ERFP50548 AC091812.2-201ENST00000619081 385 ntBASIC14.26□□□□□ -0.13
ERFP50548 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ERFP50548 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC14.26□□□□□ -0.13
ERFP50548 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERFP50548 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.26□□□□□ -0.13
ERFP50548 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ERFP50548 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERFP50548 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
ERFP50548 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ERFP50548 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC14.26□□□□□ -0.13
ERFP50548 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
ERFP50548 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ERFP50548 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 AL133267.1-201ENST00000398220 340 ntBASIC14.25□□□□□ -0.13
ERFP50548 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.25□□□□□ -0.13
ERFP50548 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.25□□□□□ -0.13
ERFP50548 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.25□□□□□ -0.13
ERFP50548 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.25□□□□□ -0.13
ERFP50548 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 IGHV3-62-201ENST00000520057 340 ntBASIC14.25□□□□□ -0.13
ERFP50548 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
ERFP50548 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.25□□□□□ -0.13
ERFP50548 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.25□□□□□ -0.13
ERFP50548 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ERFP50548 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.25□□□□□ -0.13
ERFP50548 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
ERFP50548 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERFP50548 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERFP50548 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERFP50548 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
ERFP50548 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.24□□□□□ -0.13
ERFP50548 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.24□□□□□ -0.13
ERFP50548 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms