RNA–Protein interactions for RNA: ENST00000221476.3

CKM-201, Transcript of creatine kinase, M-type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKM, Length 1,657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKM-201ENST00000221476 NISCHQ9Y2I1 1504 aa35■■■■□ 3.19
CKM-201ENST00000221476 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
CKM-201ENST00000221476 ZCCHC6Q5VYS8 1495 aaKnown RBP29.35■■■□□ 2.29
CKM-201ENST00000221476 ABCC9O60706 1549 aa29.08■■■□□ 2.25
CKM-201ENST00000221476 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
CKM-201ENST00000221476 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
CKM-201ENST00000221476 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
CKM-201ENST00000221476 NACADO15069 1562 aa28.66■■■□□ 2.18
CKM-201ENST00000221476 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
CKM-201ENST00000221476 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
CKM-201ENST00000221476 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
CKM-201ENST00000221476 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
CKM-201ENST00000221476 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
CKM-201ENST00000221476 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
CKM-201ENST00000221476 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
CKM-201ENST00000221476 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
CKM-201ENST00000221476 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
CKM-201ENST00000221476 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
CKM-201ENST00000221476 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
CKM-201ENST00000221476 SMARCA4P51532 1647 aa26.95■■□□□ 1.9
CKM-201ENST00000221476 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
CKM-201ENST00000221476 WIZO95785 1651 aa26.72■■□□□ 1.87
CKM-201ENST00000221476 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
CKM-201ENST00000221476 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
CKM-201ENST00000221476 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
CKM-201ENST00000221476 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
CKM-201ENST00000221476 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
CKM-201ENST00000221476 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
CKM-201ENST00000221476 HMGXB3Q12766 1538 aa26.39■■□□□ 1.81
CKM-201ENST00000221476 CC2D2AQ9P2K1 1620 aa26.37■■□□□ 1.81
CKM-201ENST00000221476 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
CKM-201ENST00000221476 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
CKM-201ENST00000221476 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
CKM-201ENST00000221476 CFTRP13569 1480 aa25.75■■□□□ 1.71
CKM-201ENST00000221476 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
CKM-201ENST00000221476 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
CKM-201ENST00000221476 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
CKM-201ENST00000221476 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
CKM-201ENST00000221476 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
CKM-201ENST00000221476 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
CKM-201ENST00000221476 NESP48681 1621 aa25.43■■□□□ 1.66
CKM-201ENST00000221476 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.66
CKM-201ENST00000221476 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.66
CKM-201ENST00000221476 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
CKM-201ENST00000221476 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
CKM-201ENST00000221476 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
CKM-201ENST00000221476 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
CKM-201ENST00000221476 CUX1P39880 1505 aa25.23■■□□□ 1.63
CKM-201ENST00000221476 KIF21AQ7Z4S6 1674 aa25.19■■□□□ 1.62
CKM-201ENST00000221476 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
CKM-201ENST00000221476 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
CKM-201ENST00000221476 EEA1Q15075 1411 aa25.08■■□□□ 1.6
CKM-201ENST00000221476 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
CKM-201ENST00000221476 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
CKM-201ENST00000221476 MRC2Q9UBG0 1479 aa25.04■■□□□ 1.6
CKM-201ENST00000221476 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
CKM-201ENST00000221476 SOGA1O94964 1423 aa24.98■■□□□ 1.59
CKM-201ENST00000221476 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
CKM-201ENST00000221476 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
CKM-201ENST00000221476 WDR62O43379 1518 aa24.92■■□□□ 1.58
CKM-201ENST00000221476 KIF27Q86VH2 1401 aa24.89■■□□□ 1.57
CKM-201ENST00000221476 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
CKM-201ENST00000221476 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
CKM-201ENST00000221476 THOC2Q8NI27 1593 aaKnown RBP24.86■■□□□ 1.57
CKM-201ENST00000221476 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
CKM-201ENST00000221476 CUX2O14529 1486 aa24.81■■□□□ 1.56
CKM-201ENST00000221476 RAD54L2Q9Y4B4 1467 aa24.79■■□□□ 1.56
CKM-201ENST00000221476 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
CKM-201ENST00000221476 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
CKM-201ENST00000221476 LOC105371045A0A1W2PR82 267 aa24.73■■□□□ 1.55
CKM-201ENST00000221476 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
CKM-201ENST00000221476 KIF21BO75037 1637 aa24.7■■□□□ 1.54
CKM-201ENST00000221476 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
CKM-201ENST00000221476 GOLGA3Q08378 1498 aa24.64■■□□□ 1.54
CKM-201ENST00000221476 IGF1RP08069 1367 aa24.63■■□□□ 1.53
CKM-201ENST00000221476 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
CKM-201ENST00000221476 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
CKM-201ENST00000221476 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
CKM-201ENST00000221476 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
CKM-201ENST00000221476 CUL7Q14999 1698 aa24.54■■□□□ 1.52
CKM-201ENST00000221476 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
CKM-201ENST00000221476 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
CKM-201ENST00000221476 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
CKM-201ENST00000221476 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
CKM-201ENST00000221476 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
CKM-201ENST00000221476 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.51
CKM-201ENST00000221476 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
CKM-201ENST00000221476 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
CKM-201ENST00000221476 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
CKM-201ENST00000221476 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
CKM-201ENST00000221476 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
CKM-201ENST00000221476 ADAMTS12P58397 1594 aa24.33■■□□□ 1.49
CKM-201ENST00000221476 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CKM-201ENST00000221476 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
CKM-201ENST00000221476 SNAPC4Q5SXM2 1469 aa24.27■■□□□ 1.48
CKM-201ENST00000221476 CLIP1P30622 1438 aa24.21■■□□□ 1.47
CKM-201ENST00000221476 CTTNBP2Q8WZ74 1663 aa24.2■■□□□ 1.46
CKM-201ENST00000221476 SYNJ2O15056 1496 aa24.2■■□□□ 1.46
CKM-201ENST00000221476 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
CKM-201ENST00000221476 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms