RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
LINC02396-202ENST00000550636 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
LINC02396-202ENST00000550636 ZCCHC6Q5VYS8 1495 aaKnown RBP27.04■■□□□ 1.92
LINC02396-202ENST00000550636 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
LINC02396-202ENST00000550636 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
LINC02396-202ENST00000550636 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.84
LINC02396-202ENST00000550636 ABCC9O60706 1549 aa26.29■■□□□ 1.8
LINC02396-202ENST00000550636 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
LINC02396-202ENST00000550636 NACADO15069 1562 aa25.91■■□□□ 1.74
LINC02396-202ENST00000550636 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
LINC02396-202ENST00000550636 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
LINC02396-202ENST00000550636 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
LINC02396-202ENST00000550636 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
LINC02396-202ENST00000550636 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
LINC02396-202ENST00000550636 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
LINC02396-202ENST00000550636 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
LINC02396-202ENST00000550636 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
LINC02396-202ENST00000550636 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
LINC02396-202ENST00000550636 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
LINC02396-202ENST00000550636 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
LINC02396-202ENST00000550636 WIZO95785 1651 aa24.69■■□□□ 1.54
LINC02396-202ENST00000550636 SMARCA4P51532 1647 aa24.64■■□□□ 1.53
LINC02396-202ENST00000550636 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.5
LINC02396-202ENST00000550636 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
LINC02396-202ENST00000550636 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
LINC02396-202ENST00000550636 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
LINC02396-202ENST00000550636 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
LINC02396-202ENST00000550636 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
LINC02396-202ENST00000550636 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
LINC02396-202ENST00000550636 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
LINC02396-202ENST00000550636 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
LINC02396-202ENST00000550636 LOC105371045A0A1W2PR82 267 aa23.9■■□□□ 1.42
LINC02396-202ENST00000550636 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
LINC02396-202ENST00000550636 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.4
LINC02396-202ENST00000550636 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
LINC02396-202ENST00000550636 CC2D2AQ9P2K1 1620 aa23.71■■□□□ 1.39
LINC02396-202ENST00000550636 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
LINC02396-202ENST00000550636 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LINC02396-202ENST00000550636 CFTRP13569 1480 aa23.52■■□□□ 1.36
LINC02396-202ENST00000550636 SOGA1O94964 1423 aa23.47■■□□□ 1.35
LINC02396-202ENST00000550636 SYNJ1O43426 1573 aa23.47■■□□□ 1.35
LINC02396-202ENST00000550636 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
LINC02396-202ENST00000550636 EEA1Q15075 1411 aa23.38■■□□□ 1.33
LINC02396-202ENST00000550636 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
LINC02396-202ENST00000550636 RUSC2Q8N2Y8 1516 aa23.36■■□□□ 1.33
LINC02396-202ENST00000550636 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
LINC02396-202ENST00000550636 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
LINC02396-202ENST00000550636 CUX1P39880 1505 aa23.25■■□□□ 1.31
LINC02396-202ENST00000550636 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
LINC02396-202ENST00000550636 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
LINC02396-202ENST00000550636 NESP48681 1621 aa23.15■■□□□ 1.3
LINC02396-202ENST00000550636 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
LINC02396-202ENST00000550636 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
LINC02396-202ENST00000550636 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
LINC02396-202ENST00000550636 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
LINC02396-202ENST00000550636 PCGF6Q9BYE7 350 aa23.08■■□□□ 1.28
LINC02396-202ENST00000550636 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
LINC02396-202ENST00000550636 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
LINC02396-202ENST00000550636 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
LINC02396-202ENST00000550636 KIF21BO75037 1637 aa23■■□□□ 1.27
LINC02396-202ENST00000550636 CEP162Q5TB80 1403 aa23■■□□□ 1.27
LINC02396-202ENST00000550636 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
LINC02396-202ENST00000550636 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
LINC02396-202ENST00000550636 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
LINC02396-202ENST00000550636 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
LINC02396-202ENST00000550636 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
LINC02396-202ENST00000550636 CUX2O14529 1486 aa22.91■■□□□ 1.26
LINC02396-202ENST00000550636 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
LINC02396-202ENST00000550636 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
LINC02396-202ENST00000550636 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.24
LINC02396-202ENST00000550636 IGF1RP08069 1367 aa22.83■■□□□ 1.24
LINC02396-202ENST00000550636 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
LINC02396-202ENST00000550636 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
LINC02396-202ENST00000550636 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
LINC02396-202ENST00000550636 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
LINC02396-202ENST00000550636 HRCP23327 699 aa22.8■■□□□ 1.24
LINC02396-202ENST00000550636 CLIP1P30622 1438 aa22.78■■□□□ 1.24
LINC02396-202ENST00000550636 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
LINC02396-202ENST00000550636 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
LINC02396-202ENST00000550636 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
LINC02396-202ENST00000550636 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
LINC02396-202ENST00000550636 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
LINC02396-202ENST00000550636 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
LINC02396-202ENST00000550636 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
LINC02396-202ENST00000550636 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
LINC02396-202ENST00000550636 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
LINC02396-202ENST00000550636 GAPVD1Q14C86 1478 aa22.53■■□□□ 1.2
LINC02396-202ENST00000550636 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
LINC02396-202ENST00000550636 APLP2Q06481 763 aa22.51■■□□□ 1.19
LINC02396-202ENST00000550636 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
LINC02396-202ENST00000550636 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
LINC02396-202ENST00000550636 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
LINC02396-202ENST00000550636 CUL7Q14999 1698 aa22.46■■□□□ 1.19
LINC02396-202ENST00000550636 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
LINC02396-202ENST00000550636 WDR62O43379 1518 aa22.44■■□□□ 1.18
LINC02396-202ENST00000550636 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.18
LINC02396-202ENST00000550636 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
LINC02396-202ENST00000550636 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
LINC02396-202ENST00000550636 ZNF608Q9ULD9 1512 aaPredicted RBP22.31■■□□□ 1.16
LINC02396-202ENST00000550636 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms