RNA–Protein interactions for RNA: ENST00000370995.6

SERBP1-204, Transcript of SERPINE1 mRNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SERBP1, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERBP1-204ENST00000370995 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
SERBP1-204ENST00000370995 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
SERBP1-204ENST00000370995 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
SERBP1-204ENST00000370995 DCAF8L2P0C7V8 631 aa23.66■■□□□ 1.38
SERBP1-204ENST00000370995 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
SERBP1-204ENST00000370995 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
SERBP1-204ENST00000370995 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
SERBP1-204ENST00000370995 ABCC9O60706 1549 aa22.89■■□□□ 1.25
SERBP1-204ENST00000370995 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
SERBP1-204ENST00000370995 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
SERBP1-204ENST00000370995 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
SERBP1-204ENST00000370995 NACADO15069 1562 aa22.37■■□□□ 1.17
SERBP1-204ENST00000370995 HRCP23327 699 aa22.35■■□□□ 1.17
SERBP1-204ENST00000370995 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
SERBP1-204ENST00000370995 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.14
SERBP1-204ENST00000370995 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
SERBP1-204ENST00000370995 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
SERBP1-204ENST00000370995 MYT1Q01538 1121 aa22.04■■□□□ 1.12
SERBP1-204ENST00000370995 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
SERBP1-204ENST00000370995 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
SERBP1-204ENST00000370995 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
SERBP1-204ENST00000370995 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
SERBP1-204ENST00000370995 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
SERBP1-204ENST00000370995 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
SERBP1-204ENST00000370995 WIZO95785 1651 aa21.66■■□□□ 1.06
SERBP1-204ENST00000370995 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.04
SERBP1-204ENST00000370995 BICRAQ9NZM4 1560 aa21.54■■□□□ 1.04
SERBP1-204ENST00000370995 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
SERBP1-204ENST00000370995 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
SERBP1-204ENST00000370995 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
SERBP1-204ENST00000370995 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
SERBP1-204ENST00000370995 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
SERBP1-204ENST00000370995 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
SERBP1-204ENST00000370995 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
SERBP1-204ENST00000370995 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
SERBP1-204ENST00000370995 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
SERBP1-204ENST00000370995 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.96
SERBP1-204ENST00000370995 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
SERBP1-204ENST00000370995 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
SERBP1-204ENST00000370995 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
SERBP1-204ENST00000370995 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
SERBP1-204ENST00000370995 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
SERBP1-204ENST00000370995 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
SERBP1-204ENST00000370995 PRKCSHP14314 528 aaPredicted RBP20.97■□□□□ 0.95
SERBP1-204ENST00000370995 SOGA1O94964 1423 aa20.75■□□□□ 0.91
SERBP1-204ENST00000370995 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
SERBP1-204ENST00000370995 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
SERBP1-204ENST00000370995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
SERBP1-204ENST00000370995 NCAPD3P42695 1498 aa20.72■□□□□ 0.91
SERBP1-204ENST00000370995 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
SERBP1-204ENST00000370995 HMGXB3Q12766 1538 aa20.64■□□□□ 0.9
SERBP1-204ENST00000370995 SYNJ1O43426 1573 aa20.62■□□□□ 0.89
SERBP1-204ENST00000370995 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
SERBP1-204ENST00000370995 ACIN1Q9UKV3 1341 aaKnown RBP20.6■□□□□ 0.89
SERBP1-204ENST00000370995 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
SERBP1-204ENST00000370995 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
SERBP1-204ENST00000370995 UBTFP17480 764 aaKnown RBP20.54■□□□□ 0.88
SERBP1-204ENST00000370995 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
SERBP1-204ENST00000370995 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
SERBP1-204ENST00000370995 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
SERBP1-204ENST00000370995 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
SERBP1-204ENST00000370995 EEA1Q15075 1411 aa20.46■□□□□ 0.87
SERBP1-204ENST00000370995 CFTRP13569 1480 aa20.42■□□□□ 0.86
SERBP1-204ENST00000370995 CEP162Q5TB80 1403 aa20.39■□□□□ 0.85
SERBP1-204ENST00000370995 RANGAP1P46060 587 aaPredicted RBP20.38■□□□□ 0.85
SERBP1-204ENST00000370995 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
SERBP1-204ENST00000370995 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
SERBP1-204ENST00000370995 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
SERBP1-204ENST00000370995 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
SERBP1-204ENST00000370995 CUX1P39880 1505 aa20.34■□□□□ 0.85
SERBP1-204ENST00000370995 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
SERBP1-204ENST00000370995 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
SERBP1-204ENST00000370995 DNAJC5BQ9UF47 199 aa20.28■□□□□ 0.84
SERBP1-204ENST00000370995 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
SERBP1-204ENST00000370995 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
SERBP1-204ENST00000370995 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
SERBP1-204ENST00000370995 NESP48681 1621 aa20.21■□□□□ 0.83
SERBP1-204ENST00000370995 APLP2Q06481 763 aa20.21■□□□□ 0.83
SERBP1-204ENST00000370995 KIF21BO75037 1637 aa20.18■□□□□ 0.82
SERBP1-204ENST00000370995 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
SERBP1-204ENST00000370995 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
SERBP1-204ENST00000370995 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
SERBP1-204ENST00000370995 CLIP1P30622 1438 aa20.14■□□□□ 0.81
SERBP1-204ENST00000370995 PRDM2Q13029 1718 aa20.11■□□□□ 0.81
SERBP1-204ENST00000370995 CUX2O14529 1486 aa20.09■□□□□ 0.81
SERBP1-204ENST00000370995 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
SERBP1-204ENST00000370995 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
SERBP1-204ENST00000370995 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
SERBP1-204ENST00000370995 MIER1Q8N108 512 aa19.99■□□□□ 0.79
SERBP1-204ENST00000370995 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
SERBP1-204ENST00000370995 IGF1RP08069 1367 aa19.97■□□□□ 0.79
SERBP1-204ENST00000370995 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
SERBP1-204ENST00000370995 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
SERBP1-204ENST00000370995 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
SERBP1-204ENST00000370995 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
SERBP1-204ENST00000370995 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
SERBP1-204ENST00000370995 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
SERBP1-204ENST00000370995 CARMIL1Q5VZK9 1371 aa19.9■□□□□ 0.78
SERBP1-204ENST00000370995 URB2Q14146 1524 aaKnown RBP19.87■□□□□ 0.77
SERBP1-204ENST00000370995 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms