RNA–Protein interactions for RNA: ENST00000515169.5

ZFYVE28-210, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE28, Length 1,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-210ENST00000515169 NISCHQ9Y2I1 1504 aa36.99■■■■□ 3.51
ZFYVE28-210ENST00000515169 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
ZFYVE28-210ENST00000515169 ABCC9O60706 1549 aa32.45■■■□□ 2.79
ZFYVE28-210ENST00000515169 RB1CC1Q8TDY2 1594 aa31.17■■■□□ 2.58
ZFYVE28-210ENST00000515169 NACADO15069 1562 aa31.09■■■□□ 2.57
ZFYVE28-210ENST00000515169 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
ZFYVE28-210ENST00000515169 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
ZFYVE28-210ENST00000515169 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
ZFYVE28-210ENST00000515169 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
ZFYVE28-210ENST00000515169 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
ZFYVE28-210ENST00000515169 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
ZFYVE28-210ENST00000515169 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
ZFYVE28-210ENST00000515169 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
ZFYVE28-210ENST00000515169 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
ZFYVE28-210ENST00000515169 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
ZFYVE28-210ENST00000515169 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
ZFYVE28-210ENST00000515169 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
ZFYVE28-210ENST00000515169 CECR2Q9BXF3 1484 aa29.21■■■□□ 2.27
ZFYVE28-210ENST00000515169 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
ZFYVE28-210ENST00000515169 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.18
ZFYVE28-210ENST00000515169 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
ZFYVE28-210ENST00000515169 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.18
ZFYVE28-210ENST00000515169 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
ZFYVE28-210ENST00000515169 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
ZFYVE28-210ENST00000515169 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
ZFYVE28-210ENST00000515169 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
ZFYVE28-210ENST00000515169 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
ZFYVE28-210ENST00000515169 WIZO95785 1651 aa28.15■■■□□ 2.1
ZFYVE28-210ENST00000515169 RSF1Q96T23 1441 aaPredicted RBP28.11■■■□□ 2.09
ZFYVE28-210ENST00000515169 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
ZFYVE28-210ENST00000515169 NESP48681 1621 aa28.01■■■□□ 2.07
ZFYVE28-210ENST00000515169 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
ZFYVE28-210ENST00000515169 TOP2AP11388 1531 aaKnown RBP27.87■■■□□ 2.05
ZFYVE28-210ENST00000515169 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
ZFYVE28-210ENST00000515169 CUX2O14529 1486 aa27.82■■■□□ 2.04
ZFYVE28-210ENST00000515169 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
ZFYVE28-210ENST00000515169 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
ZFYVE28-210ENST00000515169 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
ZFYVE28-210ENST00000515169 CFTRP13569 1480 aa27.61■■■□□ 2.01
ZFYVE28-210ENST00000515169 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
ZFYVE28-210ENST00000515169 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
ZFYVE28-210ENST00000515169 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
ZFYVE28-210ENST00000515169 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
ZFYVE28-210ENST00000515169 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
ZFYVE28-210ENST00000515169 WDR62O43379 1518 aa27.4■■□□□ 1.98
ZFYVE28-210ENST00000515169 PRDM2Q13029 1718 aa27.4■■□□□ 1.98
ZFYVE28-210ENST00000515169 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
ZFYVE28-210ENST00000515169 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
ZFYVE28-210ENST00000515169 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
ZFYVE28-210ENST00000515169 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
ZFYVE28-210ENST00000515169 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
ZFYVE28-210ENST00000515169 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
ZFYVE28-210ENST00000515169 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
ZFYVE28-210ENST00000515169 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
ZFYVE28-210ENST00000515169 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
ZFYVE28-210ENST00000515169 CUX1P39880 1505 aa26.73■■□□□ 1.87
ZFYVE28-210ENST00000515169 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
ZFYVE28-210ENST00000515169 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
ZFYVE28-210ENST00000515169 SOGA1O94964 1423 aa26.68■■□□□ 1.86
ZFYVE28-210ENST00000515169 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
ZFYVE28-210ENST00000515169 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
ZFYVE28-210ENST00000515169 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.851e-6■■□□□ 11.4
ZFYVE28-210ENST00000515169 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
ZFYVE28-210ENST00000515169 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
ZFYVE28-210ENST00000515169 WRNQ14191 1432 aaPredicted RBP eCLIP26.52■■□□□ 1.84
ZFYVE28-210ENST00000515169 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
ZFYVE28-210ENST00000515169 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
ZFYVE28-210ENST00000515169 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
ZFYVE28-210ENST00000515169 SYNJ1O43426 1573 aa26.42■■□□□ 1.82
ZFYVE28-210ENST00000515169 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
ZFYVE28-210ENST00000515169 CHD1O14646 1710 aa26.4■■□□□ 1.82
ZFYVE28-210ENST00000515169 GAPVD1Q14C86 1478 aa26.37■■□□□ 1.81
ZFYVE28-210ENST00000515169 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
ZFYVE28-210ENST00000515169 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
ZFYVE28-210ENST00000515169 FBLN2P98095 1184 aa26.36■■□□□ 1.81
ZFYVE28-210ENST00000515169 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
ZFYVE28-210ENST00000515169 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
ZFYVE28-210ENST00000515169 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
ZFYVE28-210ENST00000515169 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
ZFYVE28-210ENST00000515169 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
ZFYVE28-210ENST00000515169 RIMBP3CA6NJZ7 1639 aa26.19■■□□□ 1.78
ZFYVE28-210ENST00000515169 RIMBP3BA6NNM3 1639 aa26.19■■□□□ 1.78
ZFYVE28-210ENST00000515169 RIMBP3Q9UFD9 1639 aa26.19■■□□□ 1.78
ZFYVE28-210ENST00000515169 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
ZFYVE28-210ENST00000515169 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
ZFYVE28-210ENST00000515169 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
ZFYVE28-210ENST00000515169 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
ZFYVE28-210ENST00000515169 FHAD1B1AJZ9 1412 aa26.07■■□□□ 1.76
ZFYVE28-210ENST00000515169 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
ZFYVE28-210ENST00000515169 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
ZFYVE28-210ENST00000515169 NUP160Q12769 1436 aa25.95■■□□□ 1.75
ZFYVE28-210ENST00000515169 CYB5RLQ6IPT4 315 aa25.95■■□□□ 1.74
ZFYVE28-210ENST00000515169 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
ZFYVE28-210ENST00000515169 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
ZFYVE28-210ENST00000515169 IGF1RP08069 1367 aa25.9■■□□□ 1.74
ZFYVE28-210ENST00000515169 CUL7Q14999 1698 aa25.84■■□□□ 1.73
ZFYVE28-210ENST00000515169 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
ZFYVE28-210ENST00000515169 CARMIL1Q5VZK9 1371 aa25.76■■□□□ 1.71
ZFYVE28-210ENST00000515169 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
ZFYVE28-210ENST00000515169 ERCC6L2Q5T890 1561 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms