RNA–Protein interactions for RNA: ENST00000571429.2

SAMD11P1-201, Transcript of sterile alpha motif domain containing 11 pseudogene 1, humanhuman

BASIC

Gene SAMD11P1, Length 661 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD11P1-201ENST00000571429 NISCHQ9Y2I1 1504 aa35.84■■■■□ 3.33
SAMD11P1-201ENST00000571429 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.64
SAMD11P1-201ENST00000571429 ABCC9O60706 1549 aa31■■■□□ 2.55
SAMD11P1-201ENST00000571429 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
SAMD11P1-201ENST00000571429 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
SAMD11P1-201ENST00000571429 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
SAMD11P1-201ENST00000571429 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
SAMD11P1-201ENST00000571429 NACADO15069 1562 aa29.47■■■□□ 2.31
SAMD11P1-201ENST00000571429 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
SAMD11P1-201ENST00000571429 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
SAMD11P1-201ENST00000571429 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
SAMD11P1-201ENST00000571429 SCRIBQ14160 1630 aa28.86■■■□□ 2.21
SAMD11P1-201ENST00000571429 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
SAMD11P1-201ENST00000571429 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
SAMD11P1-201ENST00000571429 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
SAMD11P1-201ENST00000571429 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
SAMD11P1-201ENST00000571429 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
SAMD11P1-201ENST00000571429 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
SAMD11P1-201ENST00000571429 BAZ1AQ9NRL2 1556 aaPredicted RBP27.75■■■□□ 2.03
SAMD11P1-201ENST00000571429 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
SAMD11P1-201ENST00000571429 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
SAMD11P1-201ENST00000571429 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
SAMD11P1-201ENST00000571429 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
SAMD11P1-201ENST00000571429 WIZO95785 1651 aa27.41■■□□□ 1.98
SAMD11P1-201ENST00000571429 PEG3Q9GZU2 1588 aa27.37■■□□□ 1.97
SAMD11P1-201ENST00000571429 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
SAMD11P1-201ENST00000571429 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
SAMD11P1-201ENST00000571429 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
SAMD11P1-201ENST00000571429 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
SAMD11P1-201ENST00000571429 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
SAMD11P1-201ENST00000571429 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
SAMD11P1-201ENST00000571429 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
SAMD11P1-201ENST00000571429 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
SAMD11P1-201ENST00000571429 CUX2O14529 1486 aa26.77■■□□□ 1.88
SAMD11P1-201ENST00000571429 ERCC6Q03468 1493 aa26.75■■□□□ 1.87
SAMD11P1-201ENST00000571429 NESP48681 1621 aa26.6■■□□□ 1.85
SAMD11P1-201ENST00000571429 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
SAMD11P1-201ENST00000571429 CFTRP13569 1480 aa26.41■■□□□ 1.82
SAMD11P1-201ENST00000571429 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
SAMD11P1-201ENST00000571429 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
SAMD11P1-201ENST00000571429 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
SAMD11P1-201ENST00000571429 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
SAMD11P1-201ENST00000571429 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
SAMD11P1-201ENST00000571429 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
SAMD11P1-201ENST00000571429 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
SAMD11P1-201ENST00000571429 ABCC8Q09428 1581 aa26.09■■□□□ 1.77
SAMD11P1-201ENST00000571429 WRNQ14191 1432 aaPredicted RBP eCLIP26.02■■□□□ 1.76
SAMD11P1-201ENST00000571429 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
SAMD11P1-201ENST00000571429 MRC2Q9UBG0 1479 aa26■■□□□ 1.75
SAMD11P1-201ENST00000571429 WDR62O43379 1518 aa25.94■■□□□ 1.74
SAMD11P1-201ENST00000571429 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
SAMD11P1-201ENST00000571429 SYNJ1O43426 1573 aa25.92■■□□□ 1.74
SAMD11P1-201ENST00000571429 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
SAMD11P1-201ENST00000571429 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
SAMD11P1-201ENST00000571429 CUX1P39880 1505 aa25.88■■□□□ 1.73
SAMD11P1-201ENST00000571429 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
SAMD11P1-201ENST00000571429 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
SAMD11P1-201ENST00000571429 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
SAMD11P1-201ENST00000571429 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
SAMD11P1-201ENST00000571429 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
SAMD11P1-201ENST00000571429 SOGA1O94964 1423 aa25.53■■□□□ 1.68
SAMD11P1-201ENST00000571429 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
SAMD11P1-201ENST00000571429 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
SAMD11P1-201ENST00000571429 EEA1Q15075 1411 aa25.47■■□□□ 1.67
SAMD11P1-201ENST00000571429 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
SAMD11P1-201ENST00000571429 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
SAMD11P1-201ENST00000571429 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.67
SAMD11P1-201ENST00000571429 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
SAMD11P1-201ENST00000571429 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
SAMD11P1-201ENST00000571429 RUSC2Q8N2Y8 1516 aa25.4■■□□□ 1.66
SAMD11P1-201ENST00000571429 FAM9AQ8IZU1 332 aaPredicted RBP25.39■■□□□ 1.66
SAMD11P1-201ENST00000571429 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
SAMD11P1-201ENST00000571429 ABCA5Q8WWZ7 1642 aa25.31■■□□□ 1.64
SAMD11P1-201ENST00000571429 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
SAMD11P1-201ENST00000571429 TDRD9Q8NDG6 1382 aaKnown RBP25.28■■□□□ 1.64
SAMD11P1-201ENST00000571429 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
SAMD11P1-201ENST00000571429 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
SAMD11P1-201ENST00000571429 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
SAMD11P1-201ENST00000571429 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
SAMD11P1-201ENST00000571429 EIF4G3O43432 1585 aaKnown RBP25.22■■□□□ 1.63
SAMD11P1-201ENST00000571429 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
SAMD11P1-201ENST00000571429 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.62
SAMD11P1-201ENST00000571429 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
SAMD11P1-201ENST00000571429 IGF1RP08069 1367 aa25.18■■□□□ 1.62
SAMD11P1-201ENST00000571429 KIF21BO75037 1637 aa25.15■■□□□ 1.62
SAMD11P1-201ENST00000571429 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
SAMD11P1-201ENST00000571429 CUL7Q14999 1698 aa25.14■■□□□ 1.62
SAMD11P1-201ENST00000571429 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
SAMD11P1-201ENST00000571429 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
SAMD11P1-201ENST00000571429 CHD1O14646 1710 aa25.09■■□□□ 1.61
SAMD11P1-201ENST00000571429 CARMIL1Q5VZK9 1371 aa25.07■■□□□ 1.6
SAMD11P1-201ENST00000571429 GOLGA3Q08378 1498 aa25.06■■□□□ 1.6
SAMD11P1-201ENST00000571429 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
SAMD11P1-201ENST00000571429 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
SAMD11P1-201ENST00000571429 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
SAMD11P1-201ENST00000571429 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
SAMD11P1-201ENST00000571429 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
SAMD11P1-201ENST00000571429 FHAD1B1AJZ9 1412 aa24.99■■□□□ 1.59
SAMD11P1-201ENST00000571429 EHMT2Q96KQ7 1210 aa24.99■■□□□ 1.59
SAMD11P1-201ENST00000571429 FBLN2P98095 1184 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms