RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
IGHV3-62-201ENST00000520057 CCDC180Q9P1Z9 1646 aa35.27■■■■□ 3.24
IGHV3-62-201ENST00000520057 ABCC9O60706 1549 aa34.76■■■■□ 3.16
IGHV3-62-201ENST00000520057 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
IGHV3-62-201ENST00000520057 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
IGHV3-62-201ENST00000520057 NACADO15069 1562 aa33.27■■■□□ 2.92
IGHV3-62-201ENST00000520057 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
IGHV3-62-201ENST00000520057 MYO15BQ96JP2 1530 aa32.99■■■□□ 2.87
IGHV3-62-201ENST00000520057 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.85
IGHV3-62-201ENST00000520057 PABPN1Q86U42 306 aaKnown RBP eCLIP32.56■■■□□ 2.8
IGHV3-62-201ENST00000520057 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
IGHV3-62-201ENST00000520057 SCRIBQ14160 1630 aa32.29■■■□□ 2.76
IGHV3-62-201ENST00000520057 BICRAQ9NZM4 1560 aa32.21■■■□□ 2.75
IGHV3-62-201ENST00000520057 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
IGHV3-62-201ENST00000520057 DNAJC5BQ9UF47 199 aa31.92■■■□□ 2.7
IGHV3-62-201ENST00000520057 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
IGHV3-62-201ENST00000520057 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
IGHV3-62-201ENST00000520057 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
IGHV3-62-201ENST00000520057 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
IGHV3-62-201ENST00000520057 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
IGHV3-62-201ENST00000520057 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
IGHV3-62-201ENST00000520057 NCAPD3P42695 1498 aa30.71■■■□□ 2.51
IGHV3-62-201ENST00000520057 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
IGHV3-62-201ENST00000520057 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
IGHV3-62-201ENST00000520057 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
IGHV3-62-201ENST00000520057 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
IGHV3-62-201ENST00000520057 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
IGHV3-62-201ENST00000520057 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
IGHV3-62-201ENST00000520057 WIZO95785 1651 aa30.26■■■□□ 2.43
IGHV3-62-201ENST00000520057 ERCC6Q03468 1493 aa30.06■■■□□ 2.4
IGHV3-62-201ENST00000520057 NESP48681 1621 aa30■■■□□ 2.39
IGHV3-62-201ENST00000520057 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
IGHV3-62-201ENST00000520057 LAMC3Q9Y6N6 1575 aa29.9■■■□□ 2.38
IGHV3-62-201ENST00000520057 CADPSQ9ULU8 1353 aa29.89■■■□□ 2.37
IGHV3-62-201ENST00000520057 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
IGHV3-62-201ENST00000520057 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
IGHV3-62-201ENST00000520057 CCDC88BA6NC98 1476 aa29.65■■■□□ 2.34
IGHV3-62-201ENST00000520057 CUX2O14529 1486 aa29.65■■■□□ 2.34
IGHV3-62-201ENST00000520057 CFTRP13569 1480 aa29.63■■■□□ 2.33
IGHV3-62-201ENST00000520057 KIF21AQ7Z4S6 1674 aa29.55■■■□□ 2.32
IGHV3-62-201ENST00000520057 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
IGHV3-62-201ENST00000520057 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
IGHV3-62-201ENST00000520057 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
IGHV3-62-201ENST00000520057 MRC2Q9UBG0 1479 aa29.46■■■□□ 2.31
IGHV3-62-201ENST00000520057 WDR62O43379 1518 aa29.29■■■□□ 2.28
IGHV3-62-201ENST00000520057 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
IGHV3-62-201ENST00000520057 URB2Q14146 1524 aaKnown RBP29.16■■■□□ 2.26
IGHV3-62-201ENST00000520057 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
IGHV3-62-201ENST00000520057 TOPBP1Q92547 1522 aa29■■■□□ 2.23
IGHV3-62-201ENST00000520057 DNMBPQ6XZF7 1577 aa28.95■■■□□ 2.22
IGHV3-62-201ENST00000520057 IFT140Q96RY7 1462 aa28.89■■■□□ 2.22
IGHV3-62-201ENST00000520057 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
IGHV3-62-201ENST00000520057 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
IGHV3-62-201ENST00000520057 CUX1P39880 1505 aa28.73■■■□□ 2.19
IGHV3-62-201ENST00000520057 SOGA1O94964 1423 aa28.72■■■□□ 2.19
IGHV3-62-201ENST00000520057 ZNF608Q9ULD9 1512 aaPredicted RBP28.71■■■□□ 2.19
IGHV3-62-201ENST00000520057 FGD5Q6ZNL6 1462 aa28.7■■■□□ 2.18
IGHV3-62-201ENST00000520057 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
IGHV3-62-201ENST00000520057 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
IGHV3-62-201ENST00000520057 AQRO60306 1485 aaKnown RBP eCLIP28.6■■■□□ 2.17
IGHV3-62-201ENST00000520057 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
IGHV3-62-201ENST00000520057 TDRD9Q8NDG6 1382 aaKnown RBP28.58■■■□□ 2.17
IGHV3-62-201ENST00000520057 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
IGHV3-62-201ENST00000520057 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
IGHV3-62-201ENST00000520057 FBLN2P98095 1184 aa28.47■■■□□ 2.15
IGHV3-62-201ENST00000520057 TOP2BQ02880 1626 aa28.45■■■□□ 2.14
IGHV3-62-201ENST00000520057 SYNJ1O43426 1573 aa28.43■■■□□ 2.14
IGHV3-62-201ENST00000520057 WDR97A6NE52 1622 aa28.41■■■□□ 2.14
IGHV3-62-201ENST00000520057 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
IGHV3-62-201ENST00000520057 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
IGHV3-62-201ENST00000520057 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
IGHV3-62-201ENST00000520057 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
IGHV3-62-201ENST00000520057 CHMP7Q8WUX9 453 aaPredicted RBP28.34■■■□□ 2.13
IGHV3-62-201ENST00000520057 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.13
IGHV3-62-201ENST00000520057 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
IGHV3-62-201ENST00000520057 ABCA5Q8WWZ7 1642 aa28.2■■■□□ 2.1
IGHV3-62-201ENST00000520057 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
IGHV3-62-201ENST00000520057 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
IGHV3-62-201ENST00000520057 CHD1O14646 1710 aa28.15■■■□□ 2.1
IGHV3-62-201ENST00000520057 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
IGHV3-62-201ENST00000520057 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
IGHV3-62-201ENST00000520057 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
IGHV3-62-201ENST00000520057 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
IGHV3-62-201ENST00000520057 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
IGHV3-62-201ENST00000520057 GRIN2AQ12879 1464 aa27.96■■■□□ 2.07
IGHV3-62-201ENST00000520057 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
IGHV3-62-201ENST00000520057 IGF1RP08069 1367 aa27.9■■■□□ 2.06
IGHV3-62-201ENST00000520057 RIMBP3CA6NJZ7 1639 aa27.89■■■□□ 2.06
IGHV3-62-201ENST00000520057 RIMBP3BA6NNM3 1639 aa27.89■■■□□ 2.06
IGHV3-62-201ENST00000520057 RIMBP3Q9UFD9 1639 aa27.89■■■□□ 2.06
IGHV3-62-201ENST00000520057 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
IGHV3-62-201ENST00000520057 CYB5RLQ6IPT4 315 aa27.85■■■□□ 2.05
IGHV3-62-201ENST00000520057 NUP160Q12769 1436 aa27.82■■■□□ 2.04
IGHV3-62-201ENST00000520057 CARMIL1Q5VZK9 1371 aa27.79■■■□□ 2.04
IGHV3-62-201ENST00000520057 CEP170Q5SW79 1584 aa27.76■■■□□ 2.03
IGHV3-62-201ENST00000520057 CUL7Q14999 1698 aa27.75■■■□□ 2.03
IGHV3-62-201ENST00000520057 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
IGHV3-62-201ENST00000520057 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
IGHV3-62-201ENST00000520057 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
IGHV3-62-201ENST00000520057 RAPGEF2Q9Y4G8 1499 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms