RNA–Protein interactions for RNA: ENST00000553001.1

AP000275.2-202, humanhuman

TSL 5 BASIC

Gene AP000275.2, Length 929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000275.2-202ENST00000553001 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.04
AP000275.2-202ENST00000553001 CCDC180Q9P1Z9 1646 aa35.8■■■■□ 3.32
AP000275.2-202ENST00000553001 ABCC9O60706 1549 aa35.27■■■■□ 3.24
AP000275.2-202ENST00000553001 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
AP000275.2-202ENST00000553001 RB1CC1Q8TDY2 1594 aa33.8■■■■□ 3
AP000275.2-202ENST00000553001 NACADO15069 1562 aa33.72■■■□□ 2.99
AP000275.2-202ENST00000553001 ZCCHC6Q5VYS8 1495 aaKnown RBP33.55■■■□□ 2.96
AP000275.2-202ENST00000553001 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
AP000275.2-202ENST00000553001 DCAF1Q9Y4B6 1507 aa33.3■■■□□ 2.92
AP000275.2-202ENST00000553001 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
AP000275.2-202ENST00000553001 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
AP000275.2-202ENST00000553001 BICRAQ9NZM4 1560 aa32.81■■■□□ 2.84
AP000275.2-202ENST00000553001 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
AP000275.2-202ENST00000553001 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
AP000275.2-202ENST00000553001 SHROOM4Q9ULL8 1493 aa32.37■■■□□ 2.77
AP000275.2-202ENST00000553001 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
AP000275.2-202ENST00000553001 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
AP000275.2-202ENST00000553001 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
AP000275.2-202ENST00000553001 SMARCA4P51532 1647 aa31.29■■■□□ 2.6
AP000275.2-202ENST00000553001 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
AP000275.2-202ENST00000553001 ATAD2BQ9ULI0 1458 aa31.17■■■□□ 2.58
AP000275.2-202ENST00000553001 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
AP000275.2-202ENST00000553001 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
AP000275.2-202ENST00000553001 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
AP000275.2-202ENST00000553001 HMGXB3Q12766 1538 aa30.96■■■□□ 2.55
AP000275.2-202ENST00000553001 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
AP000275.2-202ENST00000553001 BAZ1BQ9UIG0 1483 aaKnown RBP30.91■■■□□ 2.54
AP000275.2-202ENST00000553001 WIZO95785 1651 aa30.74■■■□□ 2.51
AP000275.2-202ENST00000553001 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
AP000275.2-202ENST00000553001 NESP48681 1621 aa30.5■■■□□ 2.47
AP000275.2-202ENST00000553001 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
AP000275.2-202ENST00000553001 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
AP000275.2-202ENST00000553001 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.44
AP000275.2-202ENST00000553001 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
AP000275.2-202ENST00000553001 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
AP000275.2-202ENST00000553001 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
AP000275.2-202ENST00000553001 KIF21AQ7Z4S6 1674 aa30.06■■■□□ 2.4
AP000275.2-202ENST00000553001 CUX2O14529 1486 aa30.06■■■□□ 2.4
AP000275.2-202ENST00000553001 CFTRP13569 1480 aa30.05■■■□□ 2.4
AP000275.2-202ENST00000553001 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
AP000275.2-202ENST00000553001 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
AP000275.2-202ENST00000553001 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
AP000275.2-202ENST00000553001 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
AP000275.2-202ENST00000553001 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
AP000275.2-202ENST00000553001 WDR62O43379 1518 aa29.73■■■□□ 2.35
AP000275.2-202ENST00000553001 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
AP000275.2-202ENST00000553001 URB2Q14146 1524 aaKnown RBP29.63■■■□□ 2.33
AP000275.2-202ENST00000553001 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
AP000275.2-202ENST00000553001 ABCC8Q09428 1581 aa29.36■■■□□ 2.29
AP000275.2-202ENST00000553001 DNMBPQ6XZF7 1577 aa29.35■■■□□ 2.29
AP000275.2-202ENST00000553001 DNAJC5Q9H3Z4 198 aa29.32■■■□□ 2.28
AP000275.2-202ENST00000553001 IFT140Q96RY7 1462 aa29.24■■■□□ 2.27
AP000275.2-202ENST00000553001 CUX1P39880 1505 aa29.17■■■□□ 2.26
AP000275.2-202ENST00000553001 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
AP000275.2-202ENST00000553001 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
AP000275.2-202ENST00000553001 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
AP000275.2-202ENST00000553001 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
AP000275.2-202ENST00000553001 RAD54L2Q9Y4B4 1467 aa29.08■■■□□ 2.25
AP000275.2-202ENST00000553001 SOGA1O94964 1423 aa29.07■■■□□ 2.24
AP000275.2-202ENST00000553001 AQRO60306 1485 aaKnown RBP eCLIP29.01■■■□□ 2.237e-10■■■■□ 20.8
AP000275.2-202ENST00000553001 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
AP000275.2-202ENST00000553001 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
AP000275.2-202ENST00000553001 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.22
AP000275.2-202ENST00000553001 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
AP000275.2-202ENST00000553001 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
AP000275.2-202ENST00000553001 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
AP000275.2-202ENST00000553001 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
AP000275.2-202ENST00000553001 WDR97A6NE52 1622 aa28.79■■■□□ 2.2
AP000275.2-202ENST00000553001 ABCA10Q8WWZ4 1543 aa28.78■■■□□ 2.2
AP000275.2-202ENST00000553001 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
AP000275.2-202ENST00000553001 GAPVD1Q14C86 1478 aa28.72■■■□□ 2.19
AP000275.2-202ENST00000553001 FBLN2P98095 1184 aa28.71■■■□□ 2.19
AP000275.2-202ENST00000553001 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
AP000275.2-202ENST00000553001 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
AP000275.2-202ENST00000553001 CHD1O14646 1710 aa28.63■■■□□ 2.17
AP000275.2-202ENST00000553001 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
AP000275.2-202ENST00000553001 PBRM1Q86U86 1689 aa28.6■■■□□ 2.17
AP000275.2-202ENST00000553001 CHMP7Q8WUX9 453 aaPredicted RBP28.59■■■□□ 2.17
AP000275.2-202ENST00000553001 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
AP000275.2-202ENST00000553001 ERICH3Q5RHP9 1530 aa28.42■■■□□ 2.14
AP000275.2-202ENST00000553001 ADAMTS12P58397 1594 aa28.39■■■□□ 2.14
AP000275.2-202ENST00000553001 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
AP000275.2-202ENST00000553001 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
AP000275.2-202ENST00000553001 ARHGEF11O15085 1522 aa28.36■■■□□ 2.13
AP000275.2-202ENST00000553001 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
AP000275.2-202ENST00000553001 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
AP000275.2-202ENST00000553001 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
AP000275.2-202ENST00000553001 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
AP000275.2-202ENST00000553001 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
AP000275.2-202ENST00000553001 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
AP000275.2-202ENST00000553001 IGF1RP08069 1367 aa28.27■■■□□ 2.12
AP000275.2-202ENST00000553001 NUP160Q12769 1436 aa28.22■■■□□ 2.11
AP000275.2-202ENST00000553001 CEP170Q5SW79 1584 aa28.2■■■□□ 2.11
AP000275.2-202ENST00000553001 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
AP000275.2-202ENST00000553001 ARAP1Q96P48 1450 aa28.14■■■□□ 2.09
AP000275.2-202ENST00000553001 RUSC2Q8N2Y8 1516 aa28.12■■■□□ 2.09
AP000275.2-202ENST00000553001 CUL7Q14999 1698 aa28.11■■■□□ 2.09
AP000275.2-202ENST00000553001 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
AP000275.2-202ENST00000553001 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
AP000275.2-202ENST00000553001 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms