RNA–Protein interactions for RNA: ENST00000322088.10

PPP2R1A-201, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP2R1A, Length 5,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-201ENST00000322088 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
PPP2R1A-201ENST00000322088 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
PPP2R1A-201ENST00000322088 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
PPP2R1A-201ENST00000322088 SHROOM4Q9ULL8 1493 aa22.61■■□□□ 1.21
PPP2R1A-201ENST00000322088 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
PPP2R1A-201ENST00000322088 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.1
PPP2R1A-201ENST00000322088 APLP2Q06481 763 aa21.88■■□□□ 1.09
PPP2R1A-201ENST00000322088 MYT1Q01538 1121 aa21.76■■□□□ 1.07
PPP2R1A-201ENST00000322088 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
PPP2R1A-201ENST00000322088 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
PPP2R1A-201ENST00000322088 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
PPP2R1A-201ENST00000322088 CENPBP07199 599 aaPredicted RBP21.29■■□□□ 1
PPP2R1A-201ENST00000322088 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
PPP2R1A-201ENST00000322088 TTBK1Q5TCY1 1321 aaPredicted RBP21.18■□□□□ 0.98
PPP2R1A-201ENST00000322088 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
PPP2R1A-201ENST00000322088 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.96
PPP2R1A-201ENST00000322088 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
PPP2R1A-201ENST00000322088 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
PPP2R1A-201ENST00000322088 HRCP23327 699 aa20.91■□□□□ 0.94
PPP2R1A-201ENST00000322088 ERICH6Q7L0X2 663 aa20.8■□□□□ 0.92
PPP2R1A-201ENST00000322088 ABCC9O60706 1549 aa20.65■□□□□ 0.9
PPP2R1A-201ENST00000322088 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
PPP2R1A-201ENST00000322088 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
PPP2R1A-201ENST00000322088 NEFLP07196 543 aa20.44■□□□□ 0.86
PPP2R1A-201ENST00000322088 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
PPP2R1A-201ENST00000322088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
PPP2R1A-201ENST00000322088 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
PPP2R1A-201ENST00000322088 LOC105371045A0A1W2PR82 267 aa20.3■□□□□ 0.84
PPP2R1A-201ENST00000322088 YTHDC1Q96MU7 727 aaKnown RBP20.3■□□□□ 0.84
PPP2R1A-201ENST00000322088 ITGAEP38570 1179 aa20.24■□□□□ 0.83
PPP2R1A-201ENST00000322088 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
PPP2R1A-201ENST00000322088 PABPN1Q86U42 306 aaKnown RBP eCLIP20.16■□□□□ 0.82
PPP2R1A-201ENST00000322088 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
PPP2R1A-201ENST00000322088 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
PPP2R1A-201ENST00000322088 FAM50AQ14320 339 aaKnown RBP19.88■□□□□ 0.77
PPP2R1A-201ENST00000322088 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
PPP2R1A-201ENST00000322088 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
PPP2R1A-201ENST00000322088 TRIM52Q96A61 297 aa19.75■□□□□ 0.75
PPP2R1A-201ENST00000322088 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
PPP2R1A-201ENST00000322088 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
PPP2R1A-201ENST00000322088 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
PPP2R1A-201ENST00000322088 CSRNP3Q8WYN3 585 aa19.67■□□□□ 0.74
PPP2R1A-201ENST00000322088 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
PPP2R1A-201ENST00000322088 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
PPP2R1A-201ENST00000322088 SLC4A1APQ9BWU0 796 aaKnown RBP19.65■□□□□ 0.74
PPP2R1A-201ENST00000322088 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
PPP2R1A-201ENST00000322088 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
PPP2R1A-201ENST00000322088 FBLN2P98095 1184 aa19.61■□□□□ 0.73
PPP2R1A-201ENST00000322088 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
PPP2R1A-201ENST00000322088 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
PPP2R1A-201ENST00000322088 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
PPP2R1A-201ENST00000322088 ANP32CO43423 234 aa19.47■□□□□ 0.71
PPP2R1A-201ENST00000322088 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
PPP2R1A-201ENST00000322088 ZNF316A6NFI3 1004 aaPredicted RBP19.46■□□□□ 0.71
PPP2R1A-201ENST00000322088 P3H3Q8IVL6 736 aa19.42■□□□□ 0.7
PPP2R1A-201ENST00000322088 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
PPP2R1A-201ENST00000322088 NACADO15069 1562 aa19.35■□□□□ 0.69
PPP2R1A-201ENST00000322088 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
PPP2R1A-201ENST00000322088 ZNF777Q9ULD5 760 aaPredicted RBP19.26■□□□□ 0.67
PPP2R1A-201ENST00000322088 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
PPP2R1A-201ENST00000322088 BCANQ96GW7 911 aa19.19■□□□□ 0.66
PPP2R1A-201ENST00000322088 NEFMP07197 916 aa19.16■□□□□ 0.66
PPP2R1A-201ENST00000322088 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
PPP2R1A-201ENST00000322088 TONSLQ96HA7 1378 aa19.14■□□□□ 0.65
PPP2R1A-201ENST00000322088 EEA1Q15075 1411 aa19.1■□□□□ 0.65
PPP2R1A-201ENST00000322088 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
PPP2R1A-201ENST00000322088 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
PPP2R1A-201ENST00000322088 ESF1Q9H501 851 aaKnown RBP19.06■□□□□ 0.64
PPP2R1A-201ENST00000322088 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
PPP2R1A-201ENST00000322088 ANP32AP39687 249 aaKnown RBP19.03■□□□□ 0.64
PPP2R1A-201ENST00000322088 CLIP1P30622 1438 aa19.01■□□□□ 0.63
PPP2R1A-201ENST00000322088 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
PPP2R1A-201ENST00000322088 GOLGA3Q08378 1498 aa18.96■□□□□ 0.63
PPP2R1A-201ENST00000322088 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
PPP2R1A-201ENST00000322088 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
PPP2R1A-201ENST00000322088 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
PPP2R1A-201ENST00000322088 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
PPP2R1A-201ENST00000322088 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
PPP2R1A-201ENST00000322088 STAG3Q9UJ98 1225 aa18.93■□□□□ 0.62
PPP2R1A-201ENST00000322088 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
PPP2R1A-201ENST00000322088 CHGAP10645 457 aaKnown RBP18.91■□□□□ 0.62
PPP2R1A-201ENST00000322088 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
PPP2R1A-201ENST00000322088 CHIC2Q9UKJ5 165 aa18.89■□□□□ 0.61
PPP2R1A-201ENST00000322088 FKBP8Q14318 412 aa18.88■□□□□ 0.61
PPP2R1A-201ENST00000322088 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
PPP2R1A-201ENST00000322088 GLIPR1L2Q4G1C9 344 aa18.85■□□□□ 0.61
PPP2R1A-201ENST00000322088 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
PPP2R1A-201ENST00000322088 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
PPP2R1A-201ENST00000322088 ANP32EQ9BTT0 268 aa18.83■□□□□ 0.61
PPP2R1A-201ENST00000322088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.81■□□□□ 0.6
PPP2R1A-201ENST00000322088 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
PPP2R1A-201ENST00000322088 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
PPP2R1A-201ENST00000322088 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
PPP2R1A-201ENST00000322088 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
PPP2R1A-201ENST00000322088 PLEKHD1A6NEE1 506 aa18.74■□□□□ 0.59
PPP2R1A-201ENST00000322088 TMC1Q8TDI8 760 aa18.72■□□□□ 0.59
PPP2R1A-201ENST00000322088 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
PPP2R1A-201ENST00000322088 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
PPP2R1A-201ENST00000322088 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
PPP2R1A-201ENST00000322088 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms