RNA–Protein interactions for RNA: ENST00000614486.4

PSMB6-205, Transcript of proteasome subunit beta 6, humanhuman

TSL 2 BASIC

Gene PSMB6, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-205ENST00000614486 NISCHQ9Y2I1 1504 aa35.31■■■■□ 3.24
PSMB6-205ENST00000614486 ABCC9O60706 1549 aa32.23■■■□□ 2.75
PSMB6-205ENST00000614486 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
PSMB6-205ENST00000614486 DNAJC5BQ9UF47 199 aa30.76■■■□□ 2.51
PSMB6-205ENST00000614486 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
PSMB6-205ENST00000614486 NACADO15069 1562 aa29.96■■■□□ 2.39
PSMB6-205ENST00000614486 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
PSMB6-205ENST00000614486 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.34
PSMB6-205ENST00000614486 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
PSMB6-205ENST00000614486 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
PSMB6-205ENST00000614486 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
PSMB6-205ENST00000614486 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
PSMB6-205ENST00000614486 MYO15BQ96JP2 1530 aa29.29■■■□□ 2.28
PSMB6-205ENST00000614486 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
PSMB6-205ENST00000614486 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
PSMB6-205ENST00000614486 SHROOM4Q9ULL8 1493 aa29.06■■■□□ 2.24
PSMB6-205ENST00000614486 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
PSMB6-205ENST00000614486 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
PSMB6-205ENST00000614486 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
PSMB6-205ENST00000614486 CUX2O14529 1486 aa28.1■■■□□ 2.09
PSMB6-205ENST00000614486 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
PSMB6-205ENST00000614486 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
PSMB6-205ENST00000614486 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
PSMB6-205ENST00000614486 NESP48681 1621 aa27.45■■□□□ 1.99
PSMB6-205ENST00000614486 HMGXB3Q12766 1538 aa27.42■■□□□ 1.98
PSMB6-205ENST00000614486 SMARCA2P51531 1590 aa27.39■■□□□ 1.97
PSMB6-205ENST00000614486 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
PSMB6-205ENST00000614486 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
PSMB6-205ENST00000614486 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
PSMB6-205ENST00000614486 SMARCA4P51532 1647 aa27.28■■□□□ 1.96
PSMB6-205ENST00000614486 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
PSMB6-205ENST00000614486 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
PSMB6-205ENST00000614486 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
PSMB6-205ENST00000614486 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
PSMB6-205ENST00000614486 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
PSMB6-205ENST00000614486 KIF21AQ7Z4S6 1674 aa27.11■■□□□ 1.93
PSMB6-205ENST00000614486 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
PSMB6-205ENST00000614486 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
PSMB6-205ENST00000614486 WIZO95785 1651 aa26.89■■□□□ 1.89
PSMB6-205ENST00000614486 MRC2Q9UBG0 1479 aa26.87■■□□□ 1.89
PSMB6-205ENST00000614486 WDR62O43379 1518 aa26.83■■□□□ 1.89
PSMB6-205ENST00000614486 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
PSMB6-205ENST00000614486 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
PSMB6-205ENST00000614486 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
PSMB6-205ENST00000614486 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
PSMB6-205ENST00000614486 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
PSMB6-205ENST00000614486 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
PSMB6-205ENST00000614486 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
PSMB6-205ENST00000614486 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
PSMB6-205ENST00000614486 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
PSMB6-205ENST00000614486 CFTRP13569 1480 aa26.32■■□□□ 1.8
PSMB6-205ENST00000614486 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
PSMB6-205ENST00000614486 ARHGEF11O15085 1522 aa26.27■■□□□ 1.8
PSMB6-205ENST00000614486 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
PSMB6-205ENST00000614486 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
PSMB6-205ENST00000614486 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
PSMB6-205ENST00000614486 CYB5RLQ6IPT4 315 aa26.07■■□□□ 1.76
PSMB6-205ENST00000614486 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
PSMB6-205ENST00000614486 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
PSMB6-205ENST00000614486 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
PSMB6-205ENST00000614486 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
PSMB6-205ENST00000614486 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
PSMB6-205ENST00000614486 CHD1O14646 1710 aa25.9■■□□□ 1.74
PSMB6-205ENST00000614486 AEBP2Q6ZN18 517 aaPredicted RBP25.87■■□□□ 1.73
PSMB6-205ENST00000614486 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
PSMB6-205ENST00000614486 FBLN2P98095 1184 aa25.78■■□□□ 1.72
PSMB6-205ENST00000614486 DNMBPQ6XZF7 1577 aa25.78■■□□□ 1.72
PSMB6-205ENST00000614486 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.724e-8■■■■■ 43
PSMB6-205ENST00000614486 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
PSMB6-205ENST00000614486 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
PSMB6-205ENST00000614486 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
PSMB6-205ENST00000614486 CLASP1Q7Z460 1538 aa25.58■■□□□ 1.68
PSMB6-205ENST00000614486 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
PSMB6-205ENST00000614486 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
PSMB6-205ENST00000614486 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
PSMB6-205ENST00000614486 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
PSMB6-205ENST00000614486 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
PSMB6-205ENST00000614486 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
PSMB6-205ENST00000614486 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
PSMB6-205ENST00000614486 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
PSMB6-205ENST00000614486 CUX1P39880 1505 aa25.45■■□□□ 1.66
PSMB6-205ENST00000614486 SOGA1O94964 1423 aa25.44■■□□□ 1.66
PSMB6-205ENST00000614486 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
PSMB6-205ENST00000614486 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
PSMB6-205ENST00000614486 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
PSMB6-205ENST00000614486 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
PSMB6-205ENST00000614486 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
PSMB6-205ENST00000614486 EEA1Q15075 1411 aa25.29■■□□□ 1.64
PSMB6-205ENST00000614486 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
PSMB6-205ENST00000614486 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
PSMB6-205ENST00000614486 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
PSMB6-205ENST00000614486 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
PSMB6-205ENST00000614486 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
PSMB6-205ENST00000614486 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
PSMB6-205ENST00000614486 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
PSMB6-205ENST00000614486 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
PSMB6-205ENST00000614486 RUSC2Q8N2Y8 1516 aa25.02■■□□□ 1.6
PSMB6-205ENST00000614486 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
PSMB6-205ENST00000614486 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
PSMB6-205ENST00000614486 NUP160Q12769 1436 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms