RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
TTC39B-201ENST00000297615 SHROOM4Q9ULL8 1493 aa24.72■■□□□ 1.55
TTC39B-201ENST00000297615 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
TTC39B-201ENST00000297615 SUPT5HO00267 1087 aaKnown RBP24.18■■□□□ 1.46
TTC39B-201ENST00000297615 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
TTC39B-201ENST00000297615 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
TTC39B-201ENST00000297615 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.26
TTC39B-201ENST00000297615 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
TTC39B-201ENST00000297615 ABCC9O60706 1549 aa22.79■■□□□ 1.24
TTC39B-201ENST00000297615 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
TTC39B-201ENST00000297615 FAM9AQ8IZU1 332 aaPredicted RBP22.58■■□□□ 1.2
TTC39B-201ENST00000297615 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
TTC39B-201ENST00000297615 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
TTC39B-201ENST00000297615 PCGF6Q9BYE7 350 aa22.35■■□□□ 1.17
TTC39B-201ENST00000297615 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
TTC39B-201ENST00000297615 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
TTC39B-201ENST00000297615 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
TTC39B-201ENST00000297615 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
TTC39B-201ENST00000297615 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
TTC39B-201ENST00000297615 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
TTC39B-201ENST00000297615 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
TTC39B-201ENST00000297615 HRCP23327 699 aa21.89■■□□□ 1.1
TTC39B-201ENST00000297615 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
TTC39B-201ENST00000297615 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
TTC39B-201ENST00000297615 RANGAP1P46060 587 aaPredicted RBP21.64■■□□□ 1.05
TTC39B-201ENST00000297615 NACADO15069 1562 aa21.58■■□□□ 1.04
TTC39B-201ENST00000297615 WIZO95785 1651 aa21.57■■□□□ 1.04
TTC39B-201ENST00000297615 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
TTC39B-201ENST00000297615 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
TTC39B-201ENST00000297615 ABCC8Q09428 1581 aa21.27■■□□□ 1
TTC39B-201ENST00000297615 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
TTC39B-201ENST00000297615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
TTC39B-201ENST00000297615 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
TTC39B-201ENST00000297615 SOGA1O94964 1423 aa21.12■□□□□ 0.97
TTC39B-201ENST00000297615 RUSC2Q8N2Y8 1516 aa21.07■□□□□ 0.96
TTC39B-201ENST00000297615 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
TTC39B-201ENST00000297615 SMARCA4P51532 1647 aa21■□□□□ 0.95
TTC39B-201ENST00000297615 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
TTC39B-201ENST00000297615 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
TTC39B-201ENST00000297615 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
TTC39B-201ENST00000297615 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
TTC39B-201ENST00000297615 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TTC39B-201ENST00000297615 SMARCA2P51531 1590 aa20.87■□□□□ 0.93
TTC39B-201ENST00000297615 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
TTC39B-201ENST00000297615 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
TTC39B-201ENST00000297615 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
TTC39B-201ENST00000297615 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
TTC39B-201ENST00000297615 CEP162Q5TB80 1403 aa20.73■□□□□ 0.91
TTC39B-201ENST00000297615 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
TTC39B-201ENST00000297615 APLP2Q06481 763 aa20.66■□□□□ 0.9
TTC39B-201ENST00000297615 ITGAEP38570 1179 aa20.65■□□□□ 0.9
TTC39B-201ENST00000297615 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
TTC39B-201ENST00000297615 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
TTC39B-201ENST00000297615 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
TTC39B-201ENST00000297615 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
TTC39B-201ENST00000297615 TNIKQ9UKE5 1360 aa20.49■□□□□ 0.87
TTC39B-201ENST00000297615 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
TTC39B-201ENST00000297615 CLIP1P30622 1438 aa20.43■□□□□ 0.86
TTC39B-201ENST00000297615 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
TTC39B-201ENST00000297615 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TTC39B-201ENST00000297615 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
TTC39B-201ENST00000297615 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
TTC39B-201ENST00000297615 DIEXFQ68CQ4 756 aaKnown RBP20.33■□□□□ 0.84
TTC39B-201ENST00000297615 ARID3CA6NKF2 412 aa20.29■□□□□ 0.84
TTC39B-201ENST00000297615 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
TTC39B-201ENST00000297615 EEA1Q15075 1411 aa20.24■□□□□ 0.83
TTC39B-201ENST00000297615 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
TTC39B-201ENST00000297615 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
TTC39B-201ENST00000297615 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
TTC39B-201ENST00000297615 NESP48681 1621 aa20.16■□□□□ 0.82
TTC39B-201ENST00000297615 CUX1P39880 1505 aa20.15■□□□□ 0.82
TTC39B-201ENST00000297615 CUX2O14529 1486 aa20.15■□□□□ 0.82
TTC39B-201ENST00000297615 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
TTC39B-201ENST00000297615 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
TTC39B-201ENST00000297615 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
TTC39B-201ENST00000297615 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
TTC39B-201ENST00000297615 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
TTC39B-201ENST00000297615 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
TTC39B-201ENST00000297615 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
TTC39B-201ENST00000297615 GTF3C3Q9Y5Q9 886 aa20.03■□□□□ 0.8
TTC39B-201ENST00000297615 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
TTC39B-201ENST00000297615 KIF21BO75037 1637 aa20.02■□□□□ 0.8
TTC39B-201ENST00000297615 CFTRP13569 1480 aa20.02■□□□□ 0.79
TTC39B-201ENST00000297615 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
TTC39B-201ENST00000297615 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
TTC39B-201ENST00000297615 IGF1RP08069 1367 aa20■□□□□ 0.79
TTC39B-201ENST00000297615 ARAP1Q96P48 1450 aa20■□□□□ 0.79
TTC39B-201ENST00000297615 CARMIL1Q5VZK9 1371 aa19.99■□□□□ 0.79
TTC39B-201ENST00000297615 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
TTC39B-201ENST00000297615 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
TTC39B-201ENST00000297615 FGD5Q6ZNL6 1462 aa19.95■□□□□ 0.78
TTC39B-201ENST00000297615 MIER1Q8N108 512 aa19.94■□□□□ 0.78
TTC39B-201ENST00000297615 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
TTC39B-201ENST00000297615 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
TTC39B-201ENST00000297615 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
TTC39B-201ENST00000297615 FBLN2P98095 1184 aa19.88■□□□□ 0.77
TTC39B-201ENST00000297615 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
TTC39B-201ENST00000297615 FHOD3Q2V2M9 1422 aa19.84■□□□□ 0.77
TTC39B-201ENST00000297615 ARHGAP35Q9NRY4 1499 aa19.83■□□□□ 0.76
TTC39B-201ENST00000297615 CHIC2Q9UKJ5 165 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms