RNA–Protein interactions for RNA: ENST00000379984.3

RS1-201, Transcript of retinoschisin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RS1, Length 2,810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RS1-201ENST00000379984 NISCHQ9Y2I1 1504 aa28.65■■■□□ 2.18
RS1-201ENST00000379984 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
RS1-201ENST00000379984 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
RS1-201ENST00000379984 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
RS1-201ENST00000379984 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
RS1-201ENST00000379984 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
RS1-201ENST00000379984 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
RS1-201ENST00000379984 CHIC1Q5VXU3 224 aa23.1■■□□□ 1.29
RS1-201ENST00000379984 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
RS1-201ENST00000379984 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
RS1-201ENST00000379984 ABCC9O60706 1549 aa22.81■■□□□ 1.24
RS1-201ENST00000379984 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
RS1-201ENST00000379984 NACADO15069 1562 aa22.62■■□□□ 1.21
RS1-201ENST00000379984 HRCP23327 699 aa22.56■■□□□ 1.2
RS1-201ENST00000379984 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
RS1-201ENST00000379984 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
RS1-201ENST00000379984 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
RS1-201ENST00000379984 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
RS1-201ENST00000379984 PCGF6Q9BYE7 350 aa22.26■■□□□ 1.15
RS1-201ENST00000379984 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
RS1-201ENST00000379984 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
RS1-201ENST00000379984 WIZO95785 1651 aa22.11■■□□□ 1.13
RS1-201ENST00000379984 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
RS1-201ENST00000379984 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
RS1-201ENST00000379984 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
RS1-201ENST00000379984 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
RS1-201ENST00000379984 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
RS1-201ENST00000379984 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
RS1-201ENST00000379984 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
RS1-201ENST00000379984 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
RS1-201ENST00000379984 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
RS1-201ENST00000379984 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
RS1-201ENST00000379984 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
RS1-201ENST00000379984 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
RS1-201ENST00000379984 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
RS1-201ENST00000379984 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
RS1-201ENST00000379984 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
RS1-201ENST00000379984 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
RS1-201ENST00000379984 ZEB1P37275 1124 aaPredicted RBP21.4■■□□□ 1.02
RS1-201ENST00000379984 SOGA1O94964 1423 aa21.36■■□□□ 1.01
RS1-201ENST00000379984 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
RS1-201ENST00000379984 EEA1Q15075 1411 aa21.29■■□□□ 1
RS1-201ENST00000379984 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
RS1-201ENST00000379984 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
RS1-201ENST00000379984 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
RS1-201ENST00000379984 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
RS1-201ENST00000379984 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
RS1-201ENST00000379984 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
RS1-201ENST00000379984 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.98
RS1-201ENST00000379984 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
RS1-201ENST00000379984 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
RS1-201ENST00000379984 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
RS1-201ENST00000379984 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
RS1-201ENST00000379984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
RS1-201ENST00000379984 KIF21BO75037 1637 aa20.99■□□□□ 0.95
RS1-201ENST00000379984 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
RS1-201ENST00000379984 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
RS1-201ENST00000379984 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
RS1-201ENST00000379984 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
RS1-201ENST00000379984 CLIP1P30622 1438 aa20.86■□□□□ 0.93
RS1-201ENST00000379984 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
RS1-201ENST00000379984 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
RS1-201ENST00000379984 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
RS1-201ENST00000379984 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
RS1-201ENST00000379984 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
RS1-201ENST00000379984 CUX1P39880 1505 aa20.72■□□□□ 0.91
RS1-201ENST00000379984 CFTRP13569 1480 aa20.72■□□□□ 0.91
RS1-201ENST00000379984 GTF3C3Q9Y5Q9 886 aa20.72■□□□□ 0.91
RS1-201ENST00000379984 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
RS1-201ENST00000379984 PRXQ9BXM0 1461 aa20.68■□□□□ 0.9
RS1-201ENST00000379984 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
RS1-201ENST00000379984 APLP2Q06481 763 aa20.67■□□□□ 0.9
RS1-201ENST00000379984 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
RS1-201ENST00000379984 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
RS1-201ENST00000379984 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
RS1-201ENST00000379984 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
RS1-201ENST00000379984 MYT1Q01538 1121 aa20.52■□□□□ 0.88
RS1-201ENST00000379984 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
RS1-201ENST00000379984 CADPSQ9ULU8 1353 aa20.51■□□□□ 0.87
RS1-201ENST00000379984 CENPBP07199 599 aaPredicted RBP20.47■□□□□ 0.87
RS1-201ENST00000379984 CUX2O14529 1486 aa20.43■□□□□ 0.86
RS1-201ENST00000379984 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
RS1-201ENST00000379984 IGF1RP08069 1367 aa20.41■□□□□ 0.86
RS1-201ENST00000379984 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
RS1-201ENST00000379984 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
RS1-201ENST00000379984 ARHGAP35Q9NRY4 1499 aa20.38■□□□□ 0.85
RS1-201ENST00000379984 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
RS1-201ENST00000379984 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
RS1-201ENST00000379984 CARMIL1Q5VZK9 1371 aa20.31■□□□□ 0.84
RS1-201ENST00000379984 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
RS1-201ENST00000379984 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
RS1-201ENST00000379984 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
RS1-201ENST00000379984 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
RS1-201ENST00000379984 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
RS1-201ENST00000379984 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
RS1-201ENST00000379984 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
RS1-201ENST00000379984 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
RS1-201ENST00000379984 NESP48681 1621 aa20.16■□□□□ 0.82
RS1-201ENST00000379984 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
RS1-201ENST00000379984 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms