RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 NISCHQ9Y2I1 1504 aa35.84■■■■□ 3.33
CUEDC1-207ENST00000577840 CCDC180Q9P1Z9 1646 aa31.56■■■□□ 2.64
CUEDC1-207ENST00000577840 ABCC9O60706 1549 aa31.4■■■□□ 2.62
CUEDC1-207ENST00000577840 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
CUEDC1-207ENST00000577840 ZCCHC6Q5VYS8 1495 aaKnown RBP30■■■□□ 2.39
CUEDC1-207ENST00000577840 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
CUEDC1-207ENST00000577840 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
CUEDC1-207ENST00000577840 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
CUEDC1-207ENST00000577840 NACADO15069 1562 aa29.51■■■□□ 2.31
CUEDC1-207ENST00000577840 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
CUEDC1-207ENST00000577840 PABPN1Q86U42 306 aaKnown RBP eCLIP29.07■■■□□ 2.24
CUEDC1-207ENST00000577840 UNC13AQ9UPW8 1703 aa28.99■■■□□ 2.23
CUEDC1-207ENST00000577840 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
CUEDC1-207ENST00000577840 SHROOM4Q9ULL8 1493 aa28.84■■■□□ 2.21
CUEDC1-207ENST00000577840 BICRAQ9NZM4 1560 aa28.75■■■□□ 2.19
CUEDC1-207ENST00000577840 CC2D2AQ9P2K1 1620 aa28.35■■■□□ 2.13
CUEDC1-207ENST00000577840 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
CUEDC1-207ENST00000577840 DNAJC5Q9H3Z4 198 aa28.21■■■□□ 2.11
CUEDC1-207ENST00000577840 EIF4G1Q04637 1599 aaKnown RBP28.06■■■□□ 2.08
CUEDC1-207ENST00000577840 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
CUEDC1-207ENST00000577840 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
CUEDC1-207ENST00000577840 MROH2BQ7Z745 1585 aa27.62■■■□□ 2.01
CUEDC1-207ENST00000577840 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
CUEDC1-207ENST00000577840 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
CUEDC1-207ENST00000577840 WIZO95785 1651 aa27.39■■□□□ 1.97
CUEDC1-207ENST00000577840 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
CUEDC1-207ENST00000577840 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
CUEDC1-207ENST00000577840 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
CUEDC1-207ENST00000577840 CUX2O14529 1486 aa27.32■■□□□ 1.96
CUEDC1-207ENST00000577840 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
CUEDC1-207ENST00000577840 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
CUEDC1-207ENST00000577840 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
CUEDC1-207ENST00000577840 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
CUEDC1-207ENST00000577840 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
CUEDC1-207ENST00000577840 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
CUEDC1-207ENST00000577840 NESP48681 1621 aa26.78■■□□□ 1.88
CUEDC1-207ENST00000577840 THOC2Q8NI27 1593 aaKnown RBP26.68■■□□□ 1.86
CUEDC1-207ENST00000577840 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
CUEDC1-207ENST00000577840 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
CUEDC1-207ENST00000577840 KIF21AQ7Z4S6 1674 aa26.45■■□□□ 1.82
CUEDC1-207ENST00000577840 CFTRP13569 1480 aa26.43■■□□□ 1.82
CUEDC1-207ENST00000577840 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
CUEDC1-207ENST00000577840 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
CUEDC1-207ENST00000577840 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
CUEDC1-207ENST00000577840 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
CUEDC1-207ENST00000577840 CHIC1Q5VXU3 224 aa26.09■■□□□ 1.77
CUEDC1-207ENST00000577840 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
CUEDC1-207ENST00000577840 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
CUEDC1-207ENST00000577840 WDR62O43379 1518 aa26.07■■□□□ 1.76
CUEDC1-207ENST00000577840 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
CUEDC1-207ENST00000577840 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
CUEDC1-207ENST00000577840 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
CUEDC1-207ENST00000577840 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
CUEDC1-207ENST00000577840 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
CUEDC1-207ENST00000577840 CUX1P39880 1505 aa25.87■■□□□ 1.73
CUEDC1-207ENST00000577840 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
CUEDC1-207ENST00000577840 BIVM-ERCC5R4GMW8 1640 aa25.86■■□□□ 1.73
CUEDC1-207ENST00000577840 URB2Q14146 1524 aaKnown RBP25.82■■□□□ 1.72
CUEDC1-207ENST00000577840 TOPBP1Q92547 1522 aa25.82■■□□□ 1.72
CUEDC1-207ENST00000577840 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
CUEDC1-207ENST00000577840 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
CUEDC1-207ENST00000577840 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
CUEDC1-207ENST00000577840 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
CUEDC1-207ENST00000577840 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.69
CUEDC1-207ENST00000577840 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
CUEDC1-207ENST00000577840 SOGA1O94964 1423 aa25.59■■□□□ 1.69
CUEDC1-207ENST00000577840 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
CUEDC1-207ENST00000577840 IFT140Q96RY7 1462 aa25.5■■□□□ 1.67
CUEDC1-207ENST00000577840 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
CUEDC1-207ENST00000577840 EEA1Q15075 1411 aa25.47■■□□□ 1.67
CUEDC1-207ENST00000577840 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
CUEDC1-207ENST00000577840 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
CUEDC1-207ENST00000577840 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
CUEDC1-207ENST00000577840 FAM9AQ8IZU1 332 aaPredicted RBP25.43■■□□□ 1.66
CUEDC1-207ENST00000577840 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
CUEDC1-207ENST00000577840 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
CUEDC1-207ENST00000577840 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
CUEDC1-207ENST00000577840 TRHP20396 242 aaPredicted RBP25.34■■□□□ 1.65
CUEDC1-207ENST00000577840 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
CUEDC1-207ENST00000577840 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
CUEDC1-207ENST00000577840 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
CUEDC1-207ENST00000577840 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
CUEDC1-207ENST00000577840 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
CUEDC1-207ENST00000577840 CHD1O14646 1710 aa25.28■■□□□ 1.64
CUEDC1-207ENST00000577840 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
CUEDC1-207ENST00000577840 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
CUEDC1-207ENST00000577840 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
CUEDC1-207ENST00000577840 IGF1RP08069 1367 aa25.2■■□□□ 1.63
CUEDC1-207ENST00000577840 PBRM1Q86U86 1689 aa25.2■■□□□ 1.63
CUEDC1-207ENST00000577840 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
CUEDC1-207ENST00000577840 AEBP2Q6ZN18 517 aaPredicted RBP25.16■■□□□ 1.62
CUEDC1-207ENST00000577840 CUL7Q14999 1698 aa25.14■■□□□ 1.62
CUEDC1-207ENST00000577840 KIF21BO75037 1637 aa25.12■■□□□ 1.61
CUEDC1-207ENST00000577840 CARMIL1Q5VZK9 1371 aa25.11■■□□□ 1.61
CUEDC1-207ENST00000577840 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
CUEDC1-207ENST00000577840 GOLGA3Q08378 1498 aa25.06■■□□□ 1.6
CUEDC1-207ENST00000577840 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
CUEDC1-207ENST00000577840 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
CUEDC1-207ENST00000577840 RAPGEF2Q9Y4G8 1499 aa25.05■■□□□ 1.6
CUEDC1-207ENST00000577840 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms