RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
COL20A1-203ENST00000422202 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
COL20A1-203ENST00000422202 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
COL20A1-203ENST00000422202 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
COL20A1-203ENST00000422202 APLP2Q06481 763 aa21.33■■□□□ 1.01
COL20A1-203ENST00000422202 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
COL20A1-203ENST00000422202 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
COL20A1-203ENST00000422202 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
COL20A1-203ENST00000422202 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
COL20A1-203ENST00000422202 CCER1Q8TC90 406 aaPredicted RBP20.94■□□□□ 0.94
COL20A1-203ENST00000422202 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
COL20A1-203ENST00000422202 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
COL20A1-203ENST00000422202 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
COL20A1-203ENST00000422202 MYT1Q01538 1121 aa20.51■□□□□ 0.87
COL20A1-203ENST00000422202 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
COL20A1-203ENST00000422202 NEFLP07196 543 aa20.43■□□□□ 0.86
COL20A1-203ENST00000422202 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
COL20A1-203ENST00000422202 MYT1LQ9UL68 1186 aa20.36■□□□□ 0.85
COL20A1-203ENST00000422202 DAXXQ9UER7 740 aaPredicted RBP20.3■□□□□ 0.84
COL20A1-203ENST00000422202 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
COL20A1-203ENST00000422202 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
COL20A1-203ENST00000422202 POLR3GLQ9BT43 218 aa20.15■□□□□ 0.82
COL20A1-203ENST00000422202 UBTFP17480 764 aaKnown RBP20.12■□□□□ 0.81
COL20A1-203ENST00000422202 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
COL20A1-203ENST00000422202 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
COL20A1-203ENST00000422202 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
COL20A1-203ENST00000422202 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
COL20A1-203ENST00000422202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
COL20A1-203ENST00000422202 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
COL20A1-203ENST00000422202 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
COL20A1-203ENST00000422202 ITGAEP38570 1179 aa19.78■□□□□ 0.76
COL20A1-203ENST00000422202 ZNF316A6NFI3 1004 aaPredicted RBP19.75■□□□□ 0.75
COL20A1-203ENST00000422202 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
COL20A1-203ENST00000422202 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
COL20A1-203ENST00000422202 RTL5Q5HYW3 569 aaPredicted RBP19.48■□□□□ 0.71
COL20A1-203ENST00000422202 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
COL20A1-203ENST00000422202 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
COL20A1-203ENST00000422202 BCANQ96GW7 911 aa19.26■□□□□ 0.67
COL20A1-203ENST00000422202 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.65
COL20A1-203ENST00000422202 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
COL20A1-203ENST00000422202 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
COL20A1-203ENST00000422202 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
COL20A1-203ENST00000422202 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
COL20A1-203ENST00000422202 ZNF326Q5BKZ1 582 aaKnown RBP19.04■□□□□ 0.64
COL20A1-203ENST00000422202 NEFMP07197 916 aa19.01■□□□□ 0.63
COL20A1-203ENST00000422202 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
COL20A1-203ENST00000422202 HRCP23327 699 aa18.99■□□□□ 0.63
COL20A1-203ENST00000422202 FBLN2P98095 1184 aa18.98■□□□□ 0.63
COL20A1-203ENST00000422202 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
COL20A1-203ENST00000422202 DIEXFQ68CQ4 756 aaKnown RBP18.83■□□□□ 0.61
COL20A1-203ENST00000422202 ESF1Q9H501 851 aaKnown RBP18.82■□□□□ 0.6
COL20A1-203ENST00000422202 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
COL20A1-203ENST00000422202 ANP32CO43423 234 aa18.78■□□□□ 0.6
COL20A1-203ENST00000422202 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
COL20A1-203ENST00000422202 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
COL20A1-203ENST00000422202 A0A0G2JS52 829 aa18.72■□□□□ 0.59
COL20A1-203ENST00000422202 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
COL20A1-203ENST00000422202 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
COL20A1-203ENST00000422202 STAG3Q9UJ98 1225 aa18.65■□□□□ 0.58
COL20A1-203ENST00000422202 CDK11BP21127 795 aaKnown RBP18.64■□□□□ 0.57
COL20A1-203ENST00000422202 ANP32AP39687 249 aaKnown RBP18.63■□□□□ 0.57
COL20A1-203ENST00000422202 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
COL20A1-203ENST00000422202 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
COL20A1-203ENST00000422202 CHGAP10645 457 aaKnown RBP18.54■□□□□ 0.56
COL20A1-203ENST00000422202 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
COL20A1-203ENST00000422202 TULP1O00294 542 aaPredicted RBP18.48■□□□□ 0.55
COL20A1-203ENST00000422202 UPF2Q9HAU5 1272 aaKnown RBP18.48■□□□□ 0.55
COL20A1-203ENST00000422202 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
COL20A1-203ENST00000422202 ARXQ96QS3 562 aa18.47■□□□□ 0.55
COL20A1-203ENST00000422202 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
COL20A1-203ENST00000422202 GTF3C3Q9Y5Q9 886 aa18.44■□□□□ 0.54
COL20A1-203ENST00000422202 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
COL20A1-203ENST00000422202 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
COL20A1-203ENST00000422202 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
COL20A1-203ENST00000422202 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
COL20A1-203ENST00000422202 GLIPR1L2Q4G1C9 344 aa18.31■□□□□ 0.52
COL20A1-203ENST00000422202 C14orf37Q86TY3 774 aa18.27■□□□□ 0.51
COL20A1-203ENST00000422202 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
COL20A1-203ENST00000422202 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
COL20A1-203ENST00000422202 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
COL20A1-203ENST00000422202 NBR1Q14596 966 aa18.21■□□□□ 0.51
COL20A1-203ENST00000422202 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL20A1-203ENST00000422202 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
COL20A1-203ENST00000422202 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
COL20A1-203ENST00000422202 ABCC9O60706 1549 aa18.18■□□□□ 0.5
COL20A1-203ENST00000422202 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
COL20A1-203ENST00000422202 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
COL20A1-203ENST00000422202 FKBP8Q14318 412 aa18.12■□□□□ 0.49
COL20A1-203ENST00000422202 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
COL20A1-203ENST00000422202 NPHP1O15259 732 aa18.11■□□□□ 0.49
COL20A1-203ENST00000422202 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
COL20A1-203ENST00000422202 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL20A1-203ENST00000422202 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
COL20A1-203ENST00000422202 TMC1Q8TDI8 760 aa18.06■□□□□ 0.48
COL20A1-203ENST00000422202 ZRSR1Q15695 479 aaKnown RBP18.05■□□□□ 0.48
COL20A1-203ENST00000422202 ARID4BQ4LE39 1312 aaPredicted RBP18.04■□□□□ 0.48
COL20A1-203ENST00000422202 TONSLQ96HA7 1378 aa18.02■□□□□ 0.48
COL20A1-203ENST00000422202 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.48
COL20A1-203ENST00000422202 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.47
COL20A1-203ENST00000422202 TRIM44Q96DX7 344 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms