Protein–RNA interactions for Protein: O00425

IGF2BP3, Insulin-like growth factor 2 mRNA-binding protein 3, humanhuman

Known RBP eCLIP

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGF2BP3O00425 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.233e-7■■□□□ 12.8
IGF2BP3O00425 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.055e-6■■□□□ 12.8
IGF2BP3O00425 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.95■■□□□ 1.915e-6■■□□□ 12.8
IGF2BP3O00425 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.792e-7■■□□□ 12.8
IGF2BP3O00425 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.432e-7■■□□□ 12.8
IGF2BP3O00425 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.192e-7■■□□□ 12.8
IGF2BP3O00425 C1QBP-202ENST00000570805 688 ntTSL 312.62□□□□□ -0.392e-7■■□□□ 12.8
IGF2BP3O00425 C1QBP-203ENST00000573204 911 ntTSL 211.07□□□□□ -0.642e-7■■□□□ 12.8
IGF2BP3O00425 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.72□□□□□ -1.332e-7■■□□□ 12.8
IGF2BP3O00425 A2M-213ENST00000546069 593 ntTSL 57.33□□□□□ -1.246e-24■■□□□ 12.8
IGF2BP3O00425 PTBP1-206ENST00000585856 1217 ntTSL 233.38■■■□□ 2.935e-6■■□□□ 12.8
IGF2BP3O00425 PTBP1-207ENST00000585932 1030 ntTSL 325.59■■□□□ 1.695e-6■■□□□ 12.8
IGF2BP3O00425 PTBP1-210ENST00000586944 4661 ntTSL 218.12■□□□□ 0.495e-6■■□□□ 12.8
IGF2BP3O00425 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.33■□□□□ 0.525e-7■■□□□ 12.8
IGF2BP3O00425 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.525e-7■■□□□ 12.8
IGF2BP3O00425 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.45e-7■■□□□ 12.8
IGF2BP3O00425 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.62□□□□□ -0.235e-7■■□□□ 12.8
IGF2BP3O00425 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.285e-7■■□□□ 12.8
IGF2BP3O00425 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.74■□□□□ 0.273e-15■■□□□ 12.7
IGF2BP3O00425 ATP1A1-209ENST00000491156 666 ntTSL 29.46□□□□□ -0.99e-8■■□□□ 12.7
IGF2BP3O00425 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.517e-7■■□□□ 12.7
IGF2BP3O00425 PCBP2-210ENST00000547859 1919 ntTSL 211.59□□□□□ -0.551e-7■■□□□ 12.7
IGF2BP3O00425 GPX2-204ENST00000557323 778 ntTSL 38.67□□□□□ -1.023e-6■■□□□ 12.7
IGF2BP3O00425 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.646e-8■■□□□ 12.7
IGF2BP3O00425 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.685e-8■■□□□ 12.7
IGF2BP3O00425 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.815e-8■■□□□ 12.7
IGF2BP3O00425 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.875e-8■■□□□ 12.7
IGF2BP3O00425 ANPEP-208ENST00000560030 896 ntTSL 518.6■□□□□ 0.572e-6■■□□□ 12.7
IGF2BP3O00425 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.522e-6■■□□□ 12.7
IGF2BP3O00425 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.232e-6■■□□□ 12.7
IGF2BP3O00425 RPL23-205ENST00000470646 333 ntTSL 315.78■□□□□ 0.121e-7■■□□□ 12.6
IGF2BP3O00425 RPL23-202ENST00000378096 392 ntTSL 314.67□□□□□ -0.061e-7■■□□□ 12.6
IGF2BP3O00425 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.88■□□□□ 0.138e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.88■□□□□ 0.138e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC14.09□□□□□ -0.158e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.348e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.628e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC9.46□□□□□ -0.898e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)9.3□□□□□ -0.928e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC9.11□□□□□ -0.958e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC9□□□□□ -0.978e-8■■□□□ 12.6
IGF2BP3O00425 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.12□□□□□ -1.118e-8■■□□□ 12.6
IGF2BP3O00425 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC8□□□□□ -1.131e-7■■□□□ 12.6
IGF2BP3O00425 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.41e-6■■□□□ 12.6
IGF2BP3O00425 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.232e-7■■□□□ 12.6
IGF2BP3O00425 GDI2-207ENST00000479928 2499 ntTSL 210.03□□□□□ -0.82e-7■■□□□ 12.6
IGF2BP3O00425 C16orf72-202ENST00000574285 10359 ntTSL 25.34□□□□□ -1.551e-6■■□□□ 12.6
IGF2BP3O00425 AC087190.4-201ENST00000574616 8334 ntBASIC4.72□□□□□ -1.651e-6■■□□□ 12.6
IGF2BP3O00425 ATP2A2-203ENST00000377685 5702 ntTSL 522.74■■□□□ 1.233e-8■■□□□ 12.5
IGF2BP3O00425 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.693e-8■■□□□ 12.5
IGF2BP3O00425 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.273e-8■■□□□ 12.5
IGF2BP3O00425 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)8.89□□□□□ -0.993e-8■■□□□ 12.5
IGF2BP3O00425 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.85e-6■■□□□ 12.5
IGF2BP3O00425 NINJ1-204ENST00000489274 2026 ntTSL 215.54■□□□□ 0.085e-6■■□□□ 12.5
IGF2BP3O00425 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.217e-9■■□□□ 12.5
IGF2BP3O00425 CFL1-210ENST00000530945 1509 ntTSL 219.12■□□□□ 0.657e-9■■□□□ 12.5
IGF2BP3O00425 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.647e-9■■□□□ 12.5
IGF2BP3O00425 CFL1-207ENST00000527752 766 ntTSL 514.6□□□□□ -0.077e-9■■□□□ 12.5
IGF2BP3O00425 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.031e-7■■□□□ 12.4
IGF2BP3O00425 ATP11A-217ENST00000614170 3542 nt10.78□□□□□ -0.683e-7■■□□□ 12.4
IGF2BP3O00425 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.532e-10■■□□□ 12.4
IGF2BP3O00425 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.825e-7■■□□□ 12.4
IGF2BP3O00425 LAMP1-203ENST00000472564 5242 ntTSL 218.07■□□□□ 0.485e-7■■□□□ 12.4
IGF2BP3O00425 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.382e-6■■□□□ 12.4
IGF2BP3O00425 SPARC-202ENST00000520687 1598 ntTSL 210.6□□□□□ -0.713e-6■■□□□ 12.4
IGF2BP3O00425 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.973e-6■■□□□ 12.4
IGF2BP3O00425 FN1-215ENST00000461974 571 ntTSL 26.06□□□□□ -1.442e-14■■□□□ 12.4
IGF2BP3O00425 FN1-222ENST00000485567 584 ntTSL 1 (best)5.81□□□□□ -1.482e-14■■□□□ 12.4
IGF2BP3O00425 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.834e-7■■□□□ 12.3
IGF2BP3O00425 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.834e-7■■□□□ 12.3
IGF2BP3O00425 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.6□□□□□ -1.194e-7■■□□□ 12.3
IGF2BP3O00425 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.03□□□□□ -1.444e-7■■□□□ 12.3
IGF2BP3O00425 MRPS27-205ENST00000513900 1369 ntTSL 2 BASIC11.91□□□□□ -0.52e-6■■□□□ 12.3
IGF2BP3O00425 FN1-220ENST00000480024 576 ntTSL 28.35□□□□□ -1.071e-13■■□□□ 12.3
IGF2BP3O00425 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.17■□□□□ 0.183e-7■■□□□ 12.3
IGF2BP3O00425 ARF1-209ENST00000478424 1059 ntTSL 230.99■■■□□ 2.551e-10■■□□□ 12.3
IGF2BP3O00425 ARF1-208ENST00000478336 930 ntTSL 228.8■■■□□ 2.21e-10■■□□□ 12.3
IGF2BP3O00425 ARF1-203ENST00000470558 820 ntTSL 218.73■□□□□ 0.591e-10■■□□□ 12.3
IGF2BP3O00425 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC9.23□□□□□ -0.938e-7■■□□□ 12.3
IGF2BP3O00425 CS-215ENST00000549143 2811 ntTSL 29.21□□□□□ -0.938e-7■■□□□ 12.3
IGF2BP3O00425 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.158e-7■■□□□ 12.3
IGF2BP3O00425 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.02□□□□□ -1.456e-14■■□□□ 12.3
IGF2BP3O00425 RNU6-9-201ENST00000384776 107 ntBASIC4.44□□□□□ -1.72e-12■■□□□ 12.3
IGF2BP3O00425 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.115e-6■■□□□ 12.3
IGF2BP3O00425 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC11.11□□□□□ -0.635e-6■■□□□ 12.3
IGF2BP3O00425 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC10.4□□□□□ -0.745e-6■■□□□ 12.3
IGF2BP3O00425 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC10.3□□□□□ -0.765e-6■■□□□ 12.3
IGF2BP3O00425 NUCB1-211ENST00000485798 938 ntTSL 318.27■□□□□ 0.522e-7■■□□□ 12.3
IGF2BP3O00425 GRINA-203ENST00000525513 796 ntTSL 519.51■□□□□ 0.711e-7■■□□□ 12.3
IGF2BP3O00425 PCGF2-201ENST00000610747 459 ntTSL 215.84■□□□□ 0.131e-7■■□□□ 12.3
IGF2BP3O00425 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.22■□□□□ 0.833e-6■■□□□ 12.2
IGF2BP3O00425 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.323e-6■■□□□ 12.2
IGF2BP3O00425 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.253e-6■■□□□ 12.2
IGF2BP3O00425 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.61■□□□□ 0.253e-6■■□□□ 12.2
IGF2BP3O00425 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.173e-6■■□□□ 12.2
IGF2BP3O00425 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.3■□□□□ 0.043e-6■■□□□ 12.2
IGF2BP3O00425 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC13.43□□□□□ -0.263e-7■■□□□ 12.2
IGF2BP3O00425 PCBP2-214ENST00000549272 445 ntTSL 27.14□□□□□ -1.272e-7■■□□□ 12.2
IGF2BP3O00425 RACK1-217ENST00000507756 889 ntTSL 511.24□□□□□ -0.616e-8■■□□□ 12.2
IGF2BP3O00425 RACK1-222ENST00000509535 456 ntTSL 311.24□□□□□ -0.616e-8■■□□□ 12.2
Retrieved 100 of 3,649 protein–RNA pairs in 29.5 ms