RNA–Protein interactions for RNA: ENST00000507756.5

RACK1-217, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-217ENST00000507756 NISCHQ9Y2I1 1504 aa22.15■■□□□ 1.14
RACK1-217ENST00000507756 ABCC9O60706 1549 aa20.68■□□□□ 0.9
RACK1-217ENST00000507756 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
RACK1-217ENST00000507756 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
RACK1-217ENST00000507756 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
RACK1-217ENST00000507756 RB1CC1Q8TDY2 1594 aa19.46■□□□□ 0.71
RACK1-217ENST00000507756 NACADO15069 1562 aa19.17■□□□□ 0.66
RACK1-217ENST00000507756 UNC13AQ9UPW8 1703 aa19.16■□□□□ 0.66
RACK1-217ENST00000507756 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
RACK1-217ENST00000507756 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
RACK1-217ENST00000507756 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
RACK1-217ENST00000507756 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
RACK1-217ENST00000507756 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
RACK1-217ENST00000507756 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
RACK1-217ENST00000507756 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
RACK1-217ENST00000507756 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
RACK1-217ENST00000507756 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
RACK1-217ENST00000507756 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
RACK1-217ENST00000507756 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
RACK1-217ENST00000507756 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
RACK1-217ENST00000507756 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
RACK1-217ENST00000507756 CUX2O14529 1486 aa18.04■□□□□ 0.48
RACK1-217ENST00000507756 ERCC6Q03468 1493 aa17.88■□□□□ 0.45
RACK1-217ENST00000507756 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
RACK1-217ENST00000507756 NESP48681 1621 aa17.61■□□□□ 0.41
RACK1-217ENST00000507756 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
RACK1-217ENST00000507756 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
RACK1-217ENST00000507756 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
RACK1-217ENST00000507756 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
RACK1-217ENST00000507756 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
RACK1-217ENST00000507756 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
RACK1-217ENST00000507756 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
RACK1-217ENST00000507756 LAMC3Q9Y6N6 1575 aa17.41■□□□□ 0.38
RACK1-217ENST00000507756 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
RACK1-217ENST00000507756 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
RACK1-217ENST00000507756 PDS5BQ9NTI5 1447 aa17.28■□□□□ 0.36
RACK1-217ENST00000507756 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
RACK1-217ENST00000507756 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
RACK1-217ENST00000507756 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
RACK1-217ENST00000507756 WDR62O43379 1518 aa17.17■□□□□ 0.34
RACK1-217ENST00000507756 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
RACK1-217ENST00000507756 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
RACK1-217ENST00000507756 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
RACK1-217ENST00000507756 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
RACK1-217ENST00000507756 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
RACK1-217ENST00000507756 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
RACK1-217ENST00000507756 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
RACK1-217ENST00000507756 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
RACK1-217ENST00000507756 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
RACK1-217ENST00000507756 WIZO95785 1651 aa16.89■□□□□ 0.29
RACK1-217ENST00000507756 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
RACK1-217ENST00000507756 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
RACK1-217ENST00000507756 CFTRP13569 1480 aa16.8■□□□□ 0.28
RACK1-217ENST00000507756 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
RACK1-217ENST00000507756 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
RACK1-217ENST00000507756 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
RACK1-217ENST00000507756 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
RACK1-217ENST00000507756 CHD1O14646 1710 aa16.7■□□□□ 0.26
RACK1-217ENST00000507756 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
RACK1-217ENST00000507756 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
RACK1-217ENST00000507756 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
RACK1-217ENST00000507756 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
RACK1-217ENST00000507756 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
RACK1-217ENST00000507756 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
RACK1-217ENST00000507756 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
RACK1-217ENST00000507756 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.233e-10■■■■■ 62.9
RACK1-217ENST00000507756 FBLN2P98095 1184 aa16.48■□□□□ 0.23
RACK1-217ENST00000507756 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
RACK1-217ENST00000507756 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
RACK1-217ENST00000507756 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
RACK1-217ENST00000507756 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
RACK1-217ENST00000507756 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
RACK1-217ENST00000507756 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
RACK1-217ENST00000507756 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
RACK1-217ENST00000507756 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
RACK1-217ENST00000507756 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
RACK1-217ENST00000507756 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
RACK1-217ENST00000507756 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
RACK1-217ENST00000507756 GAPVD1Q14C86 1478 aa16.24■□□□□ 0.19
RACK1-217ENST00000507756 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
RACK1-217ENST00000507756 SOGA1O94964 1423 aa16.23■□□□□ 0.19
RACK1-217ENST00000507756 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
RACK1-217ENST00000507756 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
RACK1-217ENST00000507756 KIF13AQ9H1H9 1805 aa16.17■□□□□ 0.18
RACK1-217ENST00000507756 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
RACK1-217ENST00000507756 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
RACK1-217ENST00000507756 FOXD1Q16676 465 aa16.14■□□□□ 0.17
RACK1-217ENST00000507756 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
RACK1-217ENST00000507756 CUX1P39880 1505 aa16.08■□□□□ 0.16
RACK1-217ENST00000507756 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
RACK1-217ENST00000507756 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
RACK1-217ENST00000507756 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
RACK1-217ENST00000507756 SHROOM2Q13796 1616 aa15.99■□□□□ 0.15
RACK1-217ENST00000507756 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
RACK1-217ENST00000507756 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
RACK1-217ENST00000507756 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
RACK1-217ENST00000507756 NUP160Q12769 1436 aa15.93■□□□□ 0.14
RACK1-217ENST00000507756 KDM4FA0A1W2PPD8 638 aa15.91■□□□□ 0.14
RACK1-217ENST00000507756 TSPOAP1O95153 1857 aa15.9■□□□□ 0.14
RACK1-217ENST00000507756 KDM6BO15054 1643 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms