RNA–Protein interactions for RNA: ENST00000377685.9

ATP2A2-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2A2, Length 5,702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-203ENST00000377685 DCAF8L2P0C7V8 631 aa37.13■■■■□ 3.53
ATP2A2-203ENST00000377685 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
ATP2A2-203ENST00000377685 PELP1Q8IZL8 1130 aaKnown RBP34.49■■■■□ 3.11
ATP2A2-203ENST00000377685 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
ATP2A2-203ENST00000377685 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
ATP2A2-203ENST00000377685 EHMT2Q96KQ7 1210 aa34.29■■■■□ 3.08
ATP2A2-203ENST00000377685 APLP2Q06481 763 aa34■■■■□ 3.03
ATP2A2-203ENST00000377685 PCGF6Q9BYE7 350 aa33.56■■■□□ 2.96
ATP2A2-203ENST00000377685 FAM9AQ8IZU1 332 aaPredicted RBP33.55■■■□□ 2.96
ATP2A2-203ENST00000377685 CENPBP07199 599 aaPredicted RBP33.27■■■□□ 2.92
ATP2A2-203ENST00000377685 TTBK1Q5TCY1 1321 aaPredicted RBP33.26■■■□□ 2.91
ATP2A2-203ENST00000377685 ERICH6Q7L0X2 663 aa33.15■■■□□ 2.9
ATP2A2-203ENST00000377685 ZEB1P37275 1124 aaPredicted RBP33.07■■■□□ 2.89
ATP2A2-203ENST00000377685 CCER1Q8TC90 406 aaPredicted RBP32.91■■■□□ 2.86
ATP2A2-203ENST00000377685 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
ATP2A2-203ENST00000377685 MYT1Q01538 1121 aa32.67■■■□□ 2.82
ATP2A2-203ENST00000377685 ATP1B4Q9UN42 357 aaPredicted RBP32.66■■■□□ 2.82
ATP2A2-203ENST00000377685 TRIM41Q8WV44 630 aa32.65■■■□□ 2.82
ATP2A2-203ENST00000377685 YTHDC1Q96MU7 727 aaKnown RBP32.51■■■□□ 2.8
ATP2A2-203ENST00000377685 NEFLP07196 543 aa32.44■■■□□ 2.78
ATP2A2-203ENST00000377685 UBTFP17480 764 aaKnown RBP32.41■■■□□ 2.78
ATP2A2-203ENST00000377685 PPARGC1BQ86YN6 1023 aaKnown RBP31.99■■■□□ 2.71
ATP2A2-203ENST00000377685 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
ATP2A2-203ENST00000377685 HRCP23327 699 aa31.96■■■□□ 2.71
ATP2A2-203ENST00000377685 DAXXQ9UER7 740 aaPredicted RBP31.57■■■□□ 2.64
ATP2A2-203ENST00000377685 MYT1LQ9UL68 1186 aa31.55■■■□□ 2.64
ATP2A2-203ENST00000377685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.48■■■□□ 2.63
ATP2A2-203ENST00000377685 HNRNPUL2Q1KMD3 747 aaKnown RBP31.48■■■□□ 2.63
ATP2A2-203ENST00000377685 POLR3GLQ9BT43 218 aa31.46■■■□□ 2.63
ATP2A2-203ENST00000377685 ITGAEP38570 1179 aa31.44■■■□□ 2.62
ATP2A2-203ENST00000377685 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
ATP2A2-203ENST00000377685 CHIC1Q5VXU3 224 aa31.2■■■□□ 2.58
ATP2A2-203ENST00000377685 DIEXFQ68CQ4 756 aaKnown RBP31.11■■■□□ 2.57
ATP2A2-203ENST00000377685 CNGB1Q14028 1251 aaPredicted RBP31.05■■■□□ 2.56
ATP2A2-203ENST00000377685 RTL5Q5HYW3 569 aaPredicted RBP31■■■□□ 2.55
ATP2A2-203ENST00000377685 SLC4A1APQ9BWU0 796 aaKnown RBP30.95■■■□□ 2.54
ATP2A2-203ENST00000377685 ZNF316A6NFI3 1004 aaPredicted RBP30.84■■■□□ 2.53
ATP2A2-203ENST00000377685 CLSPNQ9HAW4 1339 aa30.79■■■□□ 2.52
ATP2A2-203ENST00000377685 GTF3C3Q9Y5Q9 886 aa30.74■■■□□ 2.51
ATP2A2-203ENST00000377685 BCANQ96GW7 911 aa30.64■■■□□ 2.5
ATP2A2-203ENST00000377685 FAM50AQ14320 339 aaKnown RBP30.63■■■□□ 2.49
ATP2A2-203ENST00000377685 TRIM52Q96A61 297 aa30.57■■■□□ 2.48
ATP2A2-203ENST00000377685 NEUROD1Q13562 356 aa30.41■■■□□ 2.46
ATP2A2-203ENST00000377685 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
ATP2A2-203ENST00000377685 ANP32CO43423 234 aa30.33■■■□□ 2.45
ATP2A2-203ENST00000377685 ZBTB47Q9UFB7 747 aaPredicted RBP30.28■■■□□ 2.44
ATP2A2-203ENST00000377685 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
ATP2A2-203ENST00000377685 ZNF326Q5BKZ1 582 aaKnown RBP30.21■■■□□ 2.43
ATP2A2-203ENST00000377685 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
ATP2A2-203ENST00000377685 CANXP27824 592 aaKnown RBP30.02■■■□□ 2.4
ATP2A2-203ENST00000377685 NEFMP07197 916 aa29.97■■■□□ 2.39
ATP2A2-203ENST00000377685 FBLN2P98095 1184 aa29.96■■■□□ 2.39
ATP2A2-203ENST00000377685 SLC24A1O60721 1099 aa29.93■■■□□ 2.38
ATP2A2-203ENST00000377685 ANP32AP39687 249 aaKnown RBP29.92■■■□□ 2.38
ATP2A2-203ENST00000377685 ABCC9O60706 1549 aa29.88■■■□□ 2.37
ATP2A2-203ENST00000377685 BCL11AQ9H165 835 aa29.79■■■□□ 2.36
ATP2A2-203ENST00000377685 NPM2Q86SE8 214 aaKnown RBP29.76■■■□□ 2.35
ATP2A2-203ENST00000377685 FKBP8Q14318 412 aa29.7■■■□□ 2.34
ATP2A2-203ENST00000377685 P3H3Q8IVL6 736 aa29.65■■■□□ 2.34
ATP2A2-203ENST00000377685 ARID3CA6NKF2 412 aa29.61■■■□□ 2.33
ATP2A2-203ENST00000377685 ZNF777Q9ULD5 760 aaPredicted RBP29.59■■■□□ 2.33
ATP2A2-203ENST00000377685 EIF5BO60841 1220 aaKnown RBP29.59■■■□□ 2.33
ATP2A2-203ENST00000377685 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
ATP2A2-203ENST00000377685 ESF1Q9H501 851 aaKnown RBP29.44■■■□□ 2.3
ATP2A2-203ENST00000377685 HNRNPUQ00839 825 aaKnown RBP eCLIP29.42■■■□□ 2.31e-6■□□□□ 8.3
ATP2A2-203ENST00000377685 ANP32BQ92688 251 aaKnown RBP29.39■■■□□ 2.3
ATP2A2-203ENST00000377685 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
ATP2A2-203ENST00000377685 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
ATP2A2-203ENST00000377685 HSP90AA1P07900 732 aaKnown RBP29.32■■■□□ 2.28
ATP2A2-203ENST00000377685 DDX10Q13206 875 aaKnown RBP29.32■■■□□ 2.28
ATP2A2-203ENST00000377685 STAG3Q9UJ98 1225 aa29.32■■■□□ 2.28
ATP2A2-203ENST00000377685 FAM9BQ8IZU0 186 aa29.3■■■□□ 2.28
ATP2A2-203ENST00000377685 CHGAP10645 457 aaKnown RBP29.3■■■□□ 2.28
ATP2A2-203ENST00000377685 UPF2Q9HAU5 1272 aaKnown RBP29.3■■■□□ 2.28
ATP2A2-203ENST00000377685 SCAF1Q9H7N4 1312 aaKnown RBP29.3■■■□□ 2.28
ATP2A2-203ENST00000377685 NBR1Q14596 966 aa29.28■■■□□ 2.28
ATP2A2-203ENST00000377685 GLIPR1L2Q4G1C9 344 aa29.2■■■□□ 2.26
ATP2A2-203ENST00000377685 CCDC136Q96JN2 1154 aa29.18■■■□□ 2.26
ATP2A2-203ENST00000377685 NPM1P06748 294 aaKnown RBP eCLIP29.12■■■□□ 2.25
ATP2A2-203ENST00000377685 SALL2Q9Y467 1007 aaPredicted RBP29.12■■■□□ 2.25
ATP2A2-203ENST00000377685 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.08■■■□□ 2.25
ATP2A2-203ENST00000377685 MIER1Q8N108 512 aa29.06■■■□□ 2.24
ATP2A2-203ENST00000377685 TMC1Q8TDI8 760 aa29.03■■■□□ 2.24
ATP2A2-203ENST00000377685 ARXQ96QS3 562 aa29.01■■■□□ 2.23
ATP2A2-203ENST00000377685 PLPPR3Q6T4P5 718 aa28.99■■■□□ 2.23
ATP2A2-203ENST00000377685 IRX6P78412 446 aaPredicted RBP28.99■■■□□ 2.23
ATP2A2-203ENST00000377685 WDR43Q15061 677 aaKnown RBP eCLIP28.98■■■□□ 2.23
ATP2A2-203ENST00000377685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.96■■■□□ 2.231e-6■■■□□ 15.1
ATP2A2-203ENST00000377685 MRS2Q9HD23 443 aa28.95■■■□□ 2.22
ATP2A2-203ENST00000377685 CHIC2Q9UKJ5 165 aa28.93■■■□□ 2.22
ATP2A2-203ENST00000377685 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
ATP2A2-203ENST00000377685 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
ATP2A2-203ENST00000377685 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
ATP2A2-203ENST00000377685 KDM2AQ9Y2K7 1162 aa28.79■■■□□ 2.2
ATP2A2-203ENST00000377685 MYH16Q9H6N6 1097 aa28.78■■■□□ 2.2
ATP2A2-203ENST00000377685 HIRIP3Q9BW71 556 aaPredicted RBP28.77■■■□□ 2.2
ATP2A2-203ENST00000377685 MTUS2Q5JR59 1369 aa28.74■■■□□ 2.19
ATP2A2-203ENST00000377685 ANP32EQ9BTT0 268 aa28.71■■■□□ 2.19
ATP2A2-203ENST00000377685 DDRGK1Q96HY6 314 aa28.69■■■□□ 2.18
ATP2A2-203ENST00000377685 EIF4G2P78344 907 aaKnown RBP eCLIP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms