RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
LAMP1-203ENST00000472564 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
LAMP1-203ENST00000472564 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
LAMP1-203ENST00000472564 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
LAMP1-203ENST00000472564 EHMT2Q96KQ7 1210 aa27.44■■□□□ 1.98
LAMP1-203ENST00000472564 PCGF6Q9BYE7 350 aa27.05■■□□□ 1.92
LAMP1-203ENST00000472564 FAM9AQ8IZU1 332 aaPredicted RBP26.92■■□□□ 1.9
LAMP1-203ENST00000472564 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
LAMP1-203ENST00000472564 APLP2Q06481 763 aa26.79■■□□□ 1.88
LAMP1-203ENST00000472564 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.84
LAMP1-203ENST00000472564 ZEB1P37275 1124 aaPredicted RBP26.47■■□□□ 1.83
LAMP1-203ENST00000472564 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
LAMP1-203ENST00000472564 CCER1Q8TC90 406 aaPredicted RBP26.3■■□□□ 1.8
LAMP1-203ENST00000472564 CENPBP07199 599 aaPredicted RBP26.3■■□□□ 1.8
LAMP1-203ENST00000472564 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
LAMP1-203ENST00000472564 UBTFP17480 764 aaKnown RBP26.01■■□□□ 1.75
LAMP1-203ENST00000472564 HRCP23327 699 aa25.92■■□□□ 1.74
LAMP1-203ENST00000472564 TRIM26Q12899 539 aaPredicted RBP25.91■■□□□ 1.74
LAMP1-203ENST00000472564 PPARGC1BQ86YN6 1023 aaKnown RBP25.84■■□□□ 1.73
LAMP1-203ENST00000472564 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
LAMP1-203ENST00000472564 ATP1B4Q9UN42 357 aaPredicted RBP25.75■■□□□ 1.71
LAMP1-203ENST00000472564 YTHDC1Q96MU7 727 aaKnown RBP25.73■■□□□ 1.71
LAMP1-203ENST00000472564 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
LAMP1-203ENST00000472564 ERICH6Q7L0X2 663 aa25.66■■□□□ 1.7
LAMP1-203ENST00000472564 NEFLP07196 543 aa25.51■■□□□ 1.67
LAMP1-203ENST00000472564 MYT1Q01538 1121 aa25.39■■□□□ 1.66
LAMP1-203ENST00000472564 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
LAMP1-203ENST00000472564 ITGAEP38570 1179 aa25.18■■□□□ 1.62
LAMP1-203ENST00000472564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
LAMP1-203ENST00000472564 DIEXFQ68CQ4 756 aaKnown RBP25■■□□□ 1.59
LAMP1-203ENST00000472564 POLR3GLQ9BT43 218 aa24.79■■□□□ 1.56
LAMP1-203ENST00000472564 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
LAMP1-203ENST00000472564 GTF3C3Q9Y5Q9 886 aa24.59■■□□□ 1.53
LAMP1-203ENST00000472564 DAXXQ9UER7 740 aaPredicted RBP24.56■■□□□ 1.52
LAMP1-203ENST00000472564 FAM50AQ14320 339 aaKnown RBP24.53■■□□□ 1.52
LAMP1-203ENST00000472564 ABCC9O60706 1549 aa24.45■■□□□ 1.5
LAMP1-203ENST00000472564 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
LAMP1-203ENST00000472564 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
LAMP1-203ENST00000472564 ZNF316A6NFI3 1004 aaPredicted RBP24.43■■□□□ 1.5
LAMP1-203ENST00000472564 NEUROD1Q13562 356 aa24.41■■□□□ 1.5
LAMP1-203ENST00000472564 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
LAMP1-203ENST00000472564 BCANQ96GW7 911 aa24.31■■□□□ 1.48
LAMP1-203ENST00000472564 TRIM52Q96A61 297 aa24.3■■□□□ 1.48
LAMP1-203ENST00000472564 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
LAMP1-203ENST00000472564 ANP32CO43423 234 aa24.24■■□□□ 1.47
LAMP1-203ENST00000472564 RTL5Q5HYW3 569 aaPredicted RBP24.21■■□□□ 1.47
LAMP1-203ENST00000472564 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
LAMP1-203ENST00000472564 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
LAMP1-203ENST00000472564 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.44
LAMP1-203ENST00000472564 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
LAMP1-203ENST00000472564 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
LAMP1-203ENST00000472564 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
LAMP1-203ENST00000472564 P3H3Q8IVL6 736 aa23.96■■□□□ 1.43
LAMP1-203ENST00000472564 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
LAMP1-203ENST00000472564 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
LAMP1-203ENST00000472564 FBLN2P98095 1184 aa23.72■■□□□ 1.39
LAMP1-203ENST00000472564 FKBP8Q14318 412 aa23.72■■□□□ 1.39
LAMP1-203ENST00000472564 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
LAMP1-203ENST00000472564 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
LAMP1-203ENST00000472564 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
LAMP1-203ENST00000472564 TONSLQ96HA7 1378 aa23.66■■□□□ 1.38
LAMP1-203ENST00000472564 HNRNPUQ00839 825 aaKnown RBP eCLIP23.6■■□□□ 1.37
LAMP1-203ENST00000472564 ANP32AP39687 249 aaKnown RBP23.6■■□□□ 1.37
LAMP1-203ENST00000472564 MIER1Q8N108 512 aa23.58■■□□□ 1.37
LAMP1-203ENST00000472564 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.37
LAMP1-203ENST00000472564 CANXP27824 592 aaKnown RBP23.53■■□□□ 1.36
LAMP1-203ENST00000472564 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
LAMP1-203ENST00000472564 ZBTB47Q9UFB7 747 aaPredicted RBP23.46■■□□□ 1.35
LAMP1-203ENST00000472564 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
LAMP1-203ENST00000472564 CLIP1P30622 1438 aa23.44■■□□□ 1.34
LAMP1-203ENST00000472564 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
LAMP1-203ENST00000472564 CHIC2Q9UKJ5 165 aa23.38■■□□□ 1.33
LAMP1-203ENST00000472564 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
LAMP1-203ENST00000472564 BCL11AQ9H165 835 aa23.34■■□□□ 1.33
LAMP1-203ENST00000472564 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
LAMP1-203ENST00000472564 NEFMP07197 916 aa23.32■■□□□ 1.32
LAMP1-203ENST00000472564 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
LAMP1-203ENST00000472564 MRS2Q9HD23 443 aa23.28■■□□□ 1.32
LAMP1-203ENST00000472564 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
LAMP1-203ENST00000472564 EEA1Q15075 1411 aa23.28■■□□□ 1.32
LAMP1-203ENST00000472564 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
LAMP1-203ENST00000472564 CCDC136Q96JN2 1154 aa23.27■■□□□ 1.32
LAMP1-203ENST00000472564 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
LAMP1-203ENST00000472564 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
LAMP1-203ENST00000472564 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
LAMP1-203ENST00000472564 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
LAMP1-203ENST00000472564 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
LAMP1-203ENST00000472564 EIF4G2P78344 907 aaKnown RBP eCLIP23.15■■□□□ 1.3
LAMP1-203ENST00000472564 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.29
LAMP1-203ENST00000472564 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
LAMP1-203ENST00000472564 NBR1Q14596 966 aa23.1■■□□□ 1.29
LAMP1-203ENST00000472564 CHGAP10645 457 aaKnown RBP23.09■■□□□ 1.29
LAMP1-203ENST00000472564 TSPY4P0CV99 314 aa23.09■■□□□ 1.29
LAMP1-203ENST00000472564 TSPY10P0CW01 314 aa23.09■■□□□ 1.29
LAMP1-203ENST00000472564 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
LAMP1-203ENST00000472564 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
LAMP1-203ENST00000472564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.28
LAMP1-203ENST00000472564 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.03■■□□□ 1.28
LAMP1-203ENST00000472564 EIF5BO60841 1220 aaKnown RBP23.01■■□□□ 1.27
LAMP1-203ENST00000472564 HSP90AA1P07900 732 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms