RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
FN1-215ENST00000461974 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
FN1-215ENST00000461974 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
FN1-215ENST00000461974 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
FN1-215ENST00000461974 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
FN1-215ENST00000461974 FOXD1Q16676 465 aa14.59□□□□□ -0.07
FN1-215ENST00000461974 PPP6R1Q9UPN7 881 aa14.23□□□□□ -0.13
FN1-215ENST00000461974 ADRA2BP18089 450 aa14.21□□□□□ -0.13
FN1-215ENST00000461974 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
FN1-215ENST00000461974 MSH5O43196 834 aa13.44□□□□□ -0.26
FN1-215ENST00000461974 KCNA4P22459 653 aa13.38□□□□□ -0.27
FN1-215ENST00000461974 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
FN1-215ENST00000461974 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
FN1-215ENST00000461974 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
FN1-215ENST00000461974 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
FN1-215ENST00000461974 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
FN1-215ENST00000461974 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
FN1-215ENST00000461974 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
FN1-215ENST00000461974 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
FN1-215ENST00000461974 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
FN1-215ENST00000461974 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
FN1-215ENST00000461974 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
FN1-215ENST00000461974 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
FN1-215ENST00000461974 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
FN1-215ENST00000461974 ZBTB22O15209 634 aa12.32□□□□□ -0.44
FN1-215ENST00000461974 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
FN1-215ENST00000461974 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
FN1-215ENST00000461974 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
FN1-215ENST00000461974 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
FN1-215ENST00000461974 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
FN1-215ENST00000461974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
FN1-215ENST00000461974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
FN1-215ENST00000461974 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
FN1-215ENST00000461974 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
FN1-215ENST00000461974 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
FN1-215ENST00000461974 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
FN1-215ENST00000461974 APLP2Q06481 763 aa11.61□□□□□ -0.55
FN1-215ENST00000461974 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
FN1-215ENST00000461974 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
FN1-215ENST00000461974 C1QBPQ07021 282 aaKnown RBP11.43□□□□□ -0.58
FN1-215ENST00000461974 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
FN1-215ENST00000461974 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
FN1-215ENST00000461974 FKBP8Q14318 412 aa11.25□□□□□ -0.61
FN1-215ENST00000461974 CAPN15O75808 1086 aa11.21□□□□□ -0.61
FN1-215ENST00000461974 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
FN1-215ENST00000461974 POLA2Q14181 598 aa11.13□□□□□ -0.63
FN1-215ENST00000461974 FBLN2P98095 1184 aa11.11□□□□□ -0.63
FN1-215ENST00000461974 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
FN1-215ENST00000461974 ZBTB12Q9Y330 459 aaPredicted RBP11.11□□□□□ -0.63
FN1-215ENST00000461974 DSG3P32926 999 aa11.03□□□□□ -0.64
FN1-215ENST00000461974 SPDYE4A6NLX3 237 aa10.99□□□□□ -0.65
FN1-215ENST00000461974 PROM2Q8N271 834 aa10.99□□□□□ -0.65
FN1-215ENST00000461974 ABCB7O75027 752 aa10.98□□□□□ -0.65
FN1-215ENST00000461974 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
FN1-215ENST00000461974 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
FN1-215ENST00000461974 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
FN1-215ENST00000461974 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
FN1-215ENST00000461974 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
FN1-215ENST00000461974 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
FN1-215ENST00000461974 SSUH2Q9Y2M2 353 aa10.76□□□□□ -0.69
FN1-215ENST00000461974 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
FN1-215ENST00000461974 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
FN1-215ENST00000461974 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
FN1-215ENST00000461974 VASPP50552 380 aaPredicted RBP10.67□□□□□ -0.7
FN1-215ENST00000461974 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
FN1-215ENST00000461974 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
FN1-215ENST00000461974 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
FN1-215ENST00000461974 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
FN1-215ENST00000461974 AKT1S1Q96B36 256 aa10.48□□□□□ -0.73
FN1-215ENST00000461974 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
FN1-215ENST00000461974 PLCD3Q8N3E9 789 aa10.38□□□□□ -0.75
FN1-215ENST00000461974 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
FN1-215ENST00000461974 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
FN1-215ENST00000461974 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
FN1-215ENST00000461974 MIER1Q8N108 512 aa10.35□□□□□ -0.75
FN1-215ENST00000461974 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
FN1-215ENST00000461974 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
FN1-215ENST00000461974 PKD2Q13563 968 aa10.3□□□□□ -0.76
FN1-215ENST00000461974 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
FN1-215ENST00000461974 PRR29P0C7W0 189 aa10.21□□□□□ -0.77
FN1-215ENST00000461974 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
FN1-215ENST00000461974 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
FN1-215ENST00000461974 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
FN1-215ENST00000461974 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
FN1-215ENST00000461974 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
FN1-215ENST00000461974 ECM2O94769 699 aaPredicted RBP10.14□□□□□ -0.79
FN1-215ENST00000461974 NUBP1P53384 320 aa10.13□□□□□ -0.79
FN1-215ENST00000461974 GSE1Q14687 1217 aa10.12□□□□□ -0.79
FN1-215ENST00000461974 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
FN1-215ENST00000461974 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
FN1-215ENST00000461974 FAM212AQ96EL1 285 aa10.04□□□□□ -0.8
FN1-215ENST00000461974 RGL2O15211 777 aa10.03□□□□□ -0.8
FN1-215ENST00000461974 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
FN1-215ENST00000461974 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
FN1-215ENST00000461974 FXR2P51116 673 aaKnown RBP eCLIP10□□□□□ -0.81
FN1-215ENST00000461974 CHRM1P11229 460 aaPredicted RBP9.99□□□□□ -0.81
FN1-215ENST00000461974 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
FN1-215ENST00000461974 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
FN1-215ENST00000461974 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
FN1-215ENST00000461974 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms