RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
ATP2A2-204ENST00000539276 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
ATP2A2-204ENST00000539276 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
ATP2A2-204ENST00000539276 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
ATP2A2-204ENST00000539276 PCGF6Q9BYE7 350 aa25.71■■□□□ 1.71
ATP2A2-204ENST00000539276 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
ATP2A2-204ENST00000539276 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
ATP2A2-204ENST00000539276 HRCP23327 699 aa25.22■■□□□ 1.63
ATP2A2-204ENST00000539276 FAM9AQ8IZU1 332 aaPredicted RBP25.17■■□□□ 1.62
ATP2A2-204ENST00000539276 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
ATP2A2-204ENST00000539276 PPARGC1BQ86YN6 1023 aaKnown RBP24.97■■□□□ 1.59
ATP2A2-204ENST00000539276 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
ATP2A2-204ENST00000539276 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
ATP2A2-204ENST00000539276 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
ATP2A2-204ENST00000539276 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
ATP2A2-204ENST00000539276 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.53
ATP2A2-204ENST00000539276 ZEB1P37275 1124 aaPredicted RBP24.51■■□□□ 1.51
ATP2A2-204ENST00000539276 CCER1Q8TC90 406 aaPredicted RBP24.33■■□□□ 1.48
ATP2A2-204ENST00000539276 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
ATP2A2-204ENST00000539276 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
ATP2A2-204ENST00000539276 UBTFP17480 764 aaKnown RBP24.02■■□□□ 1.44
ATP2A2-204ENST00000539276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.01■■□□□ 1.43
ATP2A2-204ENST00000539276 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
ATP2A2-204ENST00000539276 APLP2Q06481 763 aa23.93■■□□□ 1.42
ATP2A2-204ENST00000539276 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.41
ATP2A2-204ENST00000539276 PELP1Q8IZL8 1130 aaKnown RBP23.81■■□□□ 1.4
ATP2A2-204ENST00000539276 ABCC9O60706 1549 aa23.8■■□□□ 1.4
ATP2A2-204ENST00000539276 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
ATP2A2-204ENST00000539276 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
ATP2A2-204ENST00000539276 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
ATP2A2-204ENST00000539276 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
ATP2A2-204ENST00000539276 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
ATP2A2-204ENST00000539276 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
ATP2A2-204ENST00000539276 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.33
ATP2A2-204ENST00000539276 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
ATP2A2-204ENST00000539276 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.32
ATP2A2-204ENST00000539276 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
ATP2A2-204ENST00000539276 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
ATP2A2-204ENST00000539276 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
ATP2A2-204ENST00000539276 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
ATP2A2-204ENST00000539276 ITGAEP38570 1179 aa23.22■■□□□ 1.31
ATP2A2-204ENST00000539276 ATP1B4Q9UN42 357 aaPredicted RBP23.18■■□□□ 1.3
ATP2A2-204ENST00000539276 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
ATP2A2-204ENST00000539276 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
ATP2A2-204ENST00000539276 CEP162Q5TB80 1403 aa22.95■■□□□ 1.26
ATP2A2-204ENST00000539276 NACADO15069 1562 aa22.86■■□□□ 1.25
ATP2A2-204ENST00000539276 MIER1Q8N108 512 aa22.82■■□□□ 1.24
ATP2A2-204ENST00000539276 MYT1Q01538 1121 aa22.81■■□□□ 1.24
ATP2A2-204ENST00000539276 SOGA1O94964 1423 aa22.81■■□□□ 1.24
ATP2A2-204ENST00000539276 WIZO95785 1651 aa22.77■■□□□ 1.24
ATP2A2-204ENST00000539276 ABCC8Q09428 1581 aa22.75■■□□□ 1.23
ATP2A2-204ENST00000539276 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
ATP2A2-204ENST00000539276 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
ATP2A2-204ENST00000539276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.7■■□□□ 1.22
ATP2A2-204ENST00000539276 NEFLP07196 543 aa22.69■■□□□ 1.22
ATP2A2-204ENST00000539276 CLIP1P30622 1438 aa22.68■■□□□ 1.22
ATP2A2-204ENST00000539276 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
ATP2A2-204ENST00000539276 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
ATP2A2-204ENST00000539276 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
ATP2A2-204ENST00000539276 EEA1Q15075 1411 aa22.62■■□□□ 1.21
ATP2A2-204ENST00000539276 BCANQ96GW7 911 aa22.59■■□□□ 1.21
ATP2A2-204ENST00000539276 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
ATP2A2-204ENST00000539276 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
ATP2A2-204ENST00000539276 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
ATP2A2-204ENST00000539276 ERICH6Q7L0X2 663 aa22.38■■□□□ 1.17
ATP2A2-204ENST00000539276 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
ATP2A2-204ENST00000539276 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
ATP2A2-204ENST00000539276 CNGB1Q14028 1251 aaPredicted RBP22.33■■□□□ 1.16
ATP2A2-204ENST00000539276 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
ATP2A2-204ENST00000539276 VPS8Q8N3P4 1428 aa22.27■■□□□ 1.16
ATP2A2-204ENST00000539276 ANP32CO43423 234 aa22.26■■□□□ 1.15
ATP2A2-204ENST00000539276 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
ATP2A2-204ENST00000539276 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
ATP2A2-204ENST00000539276 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
ATP2A2-204ENST00000539276 FKBP8Q14318 412 aa22.22■■□□□ 1.15
ATP2A2-204ENST00000539276 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
ATP2A2-204ENST00000539276 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
ATP2A2-204ENST00000539276 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
ATP2A2-204ENST00000539276 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
ATP2A2-204ENST00000539276 CLSPNQ9HAW4 1339 aa22.12■■□□□ 1.13
ATP2A2-204ENST00000539276 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
ATP2A2-204ENST00000539276 SUPT16HQ9Y5B9 1047 aaKnown RBP22.08■■□□□ 1.13
ATP2A2-204ENST00000539276 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
ATP2A2-204ENST00000539276 KIF27Q86VH2 1401 aa22.05■■□□□ 1.12
ATP2A2-204ENST00000539276 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
ATP2A2-204ENST00000539276 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
ATP2A2-204ENST00000539276 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.11
ATP2A2-204ENST00000539276 HNRNPUQ00839 825 aaKnown RBP eCLIP21.95■■□□□ 1.1
ATP2A2-204ENST00000539276 CHIC2Q9UKJ5 165 aa21.92■■□□□ 1.1
ATP2A2-204ENST00000539276 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
ATP2A2-204ENST00000539276 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
ATP2A2-204ENST00000539276 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.09
ATP2A2-204ENST00000539276 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
ATP2A2-204ENST00000539276 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
ATP2A2-204ENST00000539276 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
ATP2A2-204ENST00000539276 MTUS2Q5JR59 1369 aa21.83■■□□□ 1.09
ATP2A2-204ENST00000539276 CUX2O14529 1486 aa21.82■■□□□ 1.08
ATP2A2-204ENST00000539276 SYNJ1O43426 1573 aa21.8■■□□□ 1.08
ATP2A2-204ENST00000539276 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
ATP2A2-204ENST00000539276 RRP7BPQ9NSQ0 103 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms