RNA–Protein interactions for RNA: ENST00000614170.1

ATP11A-217, Transcript of ATPase phospholipid transporting 11A, humanhuman

Gene ATP11A, Length 3,542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-217ENST00000614170 NISCHQ9Y2I1 1504 aa21.11■□□□□ 0.97
ATP11A-217ENST00000614170 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
ATP11A-217ENST00000614170 SHROOM4Q9ULL8 1493 aa17.9■□□□□ 0.46
ATP11A-217ENST00000614170 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
ATP11A-217ENST00000614170 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
ATP11A-217ENST00000614170 SUPT5HO00267 1087 aaKnown RBP17.4■□□□□ 0.38
ATP11A-217ENST00000614170 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
ATP11A-217ENST00000614170 ABCC9O60706 1549 aa17.03■□□□□ 0.32
ATP11A-217ENST00000614170 SCRIBQ14160 1630 aa16.95■□□□□ 0.3
ATP11A-217ENST00000614170 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
ATP11A-217ENST00000614170 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
ATP11A-217ENST00000614170 NACADO15069 1562 aa16.74■□□□□ 0.27
ATP11A-217ENST00000614170 HRCP23327 699 aa16.66■□□□□ 0.26
ATP11A-217ENST00000614170 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
ATP11A-217ENST00000614170 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
ATP11A-217ENST00000614170 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.25
ATP11A-217ENST00000614170 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
ATP11A-217ENST00000614170 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
ATP11A-217ENST00000614170 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
ATP11A-217ENST00000614170 PCGF6Q9BYE7 350 aa16.35■□□□□ 0.21
ATP11A-217ENST00000614170 WIZO95785 1651 aa16.34■□□□□ 0.21
ATP11A-217ENST00000614170 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
ATP11A-217ENST00000614170 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
ATP11A-217ENST00000614170 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.19
ATP11A-217ENST00000614170 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
ATP11A-217ENST00000614170 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
ATP11A-217ENST00000614170 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
ATP11A-217ENST00000614170 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
ATP11A-217ENST00000614170 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
ATP11A-217ENST00000614170 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
ATP11A-217ENST00000614170 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
ATP11A-217ENST00000614170 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
ATP11A-217ENST00000614170 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
ATP11A-217ENST00000614170 MYT1Q01538 1121 aa15.98■□□□□ 0.15
ATP11A-217ENST00000614170 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
ATP11A-217ENST00000614170 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
ATP11A-217ENST00000614170 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
ATP11A-217ENST00000614170 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
ATP11A-217ENST00000614170 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
ATP11A-217ENST00000614170 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
ATP11A-217ENST00000614170 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ATP11A-217ENST00000614170 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
ATP11A-217ENST00000614170 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
ATP11A-217ENST00000614170 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
ATP11A-217ENST00000614170 SYNJ1O43426 1573 aa15.58■□□□□ 0.08
ATP11A-217ENST00000614170 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
ATP11A-217ENST00000614170 GTF3C3Q9Y5Q9 886 aa15.55■□□□□ 0.08
ATP11A-217ENST00000614170 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
ATP11A-217ENST00000614170 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.08
ATP11A-217ENST00000614170 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
ATP11A-217ENST00000614170 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
ATP11A-217ENST00000614170 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
ATP11A-217ENST00000614170 EEA1Q15075 1411 aa15.46■□□□□ 0.07
ATP11A-217ENST00000614170 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
ATP11A-217ENST00000614170 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
ATP11A-217ENST00000614170 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
ATP11A-217ENST00000614170 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
ATP11A-217ENST00000614170 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
ATP11A-217ENST00000614170 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
ATP11A-217ENST00000614170 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
ATP11A-217ENST00000614170 CFTRP13569 1480 aa15.32■□□□□ 0.04
ATP11A-217ENST00000614170 CUX1P39880 1505 aa15.31■□□□□ 0.04
ATP11A-217ENST00000614170 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
ATP11A-217ENST00000614170 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
ATP11A-217ENST00000614170 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
ATP11A-217ENST00000614170 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
ATP11A-217ENST00000614170 KIF21BO75037 1637 aa15.3■□□□□ 0.04
ATP11A-217ENST00000614170 CENPBP07199 599 aaPredicted RBP15.25■□□□□ 0.03
ATP11A-217ENST00000614170 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
ATP11A-217ENST00000614170 CLIP1P30622 1438 aa15.23■□□□□ 0.03
ATP11A-217ENST00000614170 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.02
ATP11A-217ENST00000614170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
ATP11A-217ENST00000614170 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
ATP11A-217ENST00000614170 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
ATP11A-217ENST00000614170 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
ATP11A-217ENST00000614170 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
ATP11A-217ENST00000614170 VPS8Q8N3P4 1428 aa15.11■□□□□ 0.01
ATP11A-217ENST00000614170 NESP48681 1621 aa15.11■□□□□ 0.01
ATP11A-217ENST00000614170 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
ATP11A-217ENST00000614170 CUX2O14529 1486 aa15.09■□□□□ 0.01
ATP11A-217ENST00000614170 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
ATP11A-217ENST00000614170 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0.01
ATP11A-217ENST00000614170 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
ATP11A-217ENST00000614170 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
ATP11A-217ENST00000614170 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0
ATP11A-217ENST00000614170 ARAP1Q96P48 1450 aa15.03■□□□□ -0
ATP11A-217ENST00000614170 IGF1RP08069 1367 aa15.02□□□□□ -0.01
ATP11A-217ENST00000614170 APLP2Q06481 763 aa15.01□□□□□ -0.01
ATP11A-217ENST00000614170 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
ATP11A-217ENST00000614170 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
ATP11A-217ENST00000614170 PRKCSHP14314 528 aaPredicted RBP14.96□□□□□ -0.01
ATP11A-217ENST00000614170 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
ATP11A-217ENST00000614170 CARMIL1Q5VZK9 1371 aa14.95□□□□□ -0.02
ATP11A-217ENST00000614170 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
ATP11A-217ENST00000614170 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
ATP11A-217ENST00000614170 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
ATP11A-217ENST00000614170 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
ATP11A-217ENST00000614170 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
ATP11A-217ENST00000614170 LAMC3Q9Y6N6 1575 aa14.88□□□□□ -0.03
ATP11A-217ENST00000614170 ANP32EQ9BTT0 268 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms