Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 AJ011931.1-201ENST00000618749 2492 ntBASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP6V0A4Q9HBG4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ATP6V0A4Q9HBG4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AKR7A2P1-201ENST00000460134 915 ntBASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AL358472.3-201ENST00000608147 415 ntBASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AC244157.2-201ENST00000616239 1006 ntBASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 LINC01101-201ENST00000622953 1884 ntBASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
ATP6V0A4Q9HBG4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms