RNA–Protein interactions for RNA: ENST00000417538.6

RHD-204, Transcript of Rh blood group D antigen, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHD, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHD-204ENST00000417538 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
RHD-204ENST00000417538 ABCC9O60706 1549 aa34.06■■■■□ 3.04
RHD-204ENST00000417538 CCDC180Q9P1Z9 1646 aa33.39■■■□□ 2.94
RHD-204ENST00000417538 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
RHD-204ENST00000417538 RB1CC1Q8TDY2 1594 aa32.08■■■□□ 2.73
RHD-204ENST00000417538 NACADO15069 1562 aa31.7■■■□□ 2.67
RHD-204ENST00000417538 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
RHD-204ENST00000417538 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
RHD-204ENST00000417538 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
RHD-204ENST00000417538 BICRAQ9NZM4 1560 aa31.2■■■□□ 2.58
RHD-204ENST00000417538 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
RHD-204ENST00000417538 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
RHD-204ENST00000417538 CC2D2AQ9P2K1 1620 aa30.69■■■□□ 2.5
RHD-204ENST00000417538 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
RHD-204ENST00000417538 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
RHD-204ENST00000417538 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
RHD-204ENST00000417538 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
RHD-204ENST00000417538 DCAF1Q9Y4B6 1507 aa30.45■■■□□ 2.47
RHD-204ENST00000417538 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
RHD-204ENST00000417538 CUX2O14529 1486 aa29.5■■■□□ 2.31
RHD-204ENST00000417538 ERCC6Q03468 1493 aa29.43■■■□□ 2.3
RHD-204ENST00000417538 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
RHD-204ENST00000417538 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
RHD-204ENST00000417538 NESP48681 1621 aa29.11■■■□□ 2.25
RHD-204ENST00000417538 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
RHD-204ENST00000417538 SMARCA2P51531 1590 aa29.01■■■□□ 2.23
RHD-204ENST00000417538 SMARCA4P51532 1647 aa29■■■□□ 2.23
RHD-204ENST00000417538 THOC2Q8NI27 1593 aaKnown RBP28.88■■■□□ 2.21
RHD-204ENST00000417538 BAZ1BQ9UIG0 1483 aaKnown RBP28.86■■■□□ 2.21
RHD-204ENST00000417538 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
RHD-204ENST00000417538 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
RHD-204ENST00000417538 KIF21AQ7Z4S6 1674 aa28.68■■■□□ 2.18
RHD-204ENST00000417538 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
RHD-204ENST00000417538 PEG3Q9GZU2 1588 aa28.65■■■□□ 2.18
RHD-204ENST00000417538 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
RHD-204ENST00000417538 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
RHD-204ENST00000417538 MRC2Q9UBG0 1479 aa28.41■■■□□ 2.14
RHD-204ENST00000417538 CADPSQ9ULU8 1353 aa28.39■■■□□ 2.14
RHD-204ENST00000417538 WDR62O43379 1518 aa28.34■■■□□ 2.13
RHD-204ENST00000417538 CEP164Q9UPV0 1460 aa28.19■■■□□ 2.1
RHD-204ENST00000417538 WIZO95785 1651 aa28.18■■■□□ 2.1
RHD-204ENST00000417538 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
RHD-204ENST00000417538 OSCARQ8IYS5 282 aa28.05■■■□□ 2.08
RHD-204ENST00000417538 CFTRP13569 1480 aa27.95■■■□□ 2.06
RHD-204ENST00000417538 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
RHD-204ENST00000417538 RIMBP3CA6NJZ7 1639 aa27.8■■■□□ 2.04
RHD-204ENST00000417538 RIMBP3BA6NNM3 1639 aa27.8■■■□□ 2.04
RHD-204ENST00000417538 RIMBP3Q9UFD9 1639 aa27.8■■■□□ 2.04
RHD-204ENST00000417538 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.04
RHD-204ENST00000417538 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
RHD-204ENST00000417538 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
RHD-204ENST00000417538 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
RHD-204ENST00000417538 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
RHD-204ENST00000417538 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
RHD-204ENST00000417538 TOPBP1Q92547 1522 aa27.51■■□□□ 1.99
RHD-204ENST00000417538 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
RHD-204ENST00000417538 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
RHD-204ENST00000417538 CCDC88BA6NC98 1476 aa27.46■■□□□ 1.99
RHD-204ENST00000417538 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
RHD-204ENST00000417538 CHD1O14646 1710 aa27.38■■□□□ 1.97
RHD-204ENST00000417538 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
RHD-204ENST00000417538 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
RHD-204ENST00000417538 DNMBPQ6XZF7 1577 aa27.35■■□□□ 1.97
RHD-204ENST00000417538 FBLN2P98095 1184 aa27.32■■□□□ 1.96
RHD-204ENST00000417538 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
RHD-204ENST00000417538 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
RHD-204ENST00000417538 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.94
RHD-204ENST00000417538 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
RHD-204ENST00000417538 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
RHD-204ENST00000417538 SNAPC4Q5SXM2 1469 aa27.08■■□□□ 1.93
RHD-204ENST00000417538 SOGA1O94964 1423 aa27.04■■□□□ 1.92
RHD-204ENST00000417538 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
RHD-204ENST00000417538 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
RHD-204ENST00000417538 CHMP7Q8WUX9 453 aaPredicted RBP26.97■■□□□ 1.91
RHD-204ENST00000417538 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
RHD-204ENST00000417538 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
RHD-204ENST00000417538 MAGI1Q96QZ7 1491 aaPredicted RBP26.91■■□□□ 1.9
RHD-204ENST00000417538 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
RHD-204ENST00000417538 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
RHD-204ENST00000417538 CUX1P39880 1505 aa26.85■■□□□ 1.89
RHD-204ENST00000417538 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
RHD-204ENST00000417538 GAPVD1Q14C86 1478 aa26.8■■□□□ 1.88
RHD-204ENST00000417538 PBRM1Q86U86 1689 aa26.74■■□□□ 1.87
RHD-204ENST00000417538 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.86
RHD-204ENST00000417538 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
RHD-204ENST00000417538 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
RHD-204ENST00000417538 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
RHD-204ENST00000417538 CEP170Q5SW79 1584 aa26.51■■□□□ 1.83
RHD-204ENST00000417538 ADAMTS12P58397 1594 aa26.48■■□□□ 1.83
RHD-204ENST00000417538 NUP160Q12769 1436 aa26.46■■□□□ 1.83
RHD-204ENST00000417538 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
RHD-204ENST00000417538 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
RHD-204ENST00000417538 KIF13AQ9H1H9 1805 aa26.35■■□□□ 1.81
RHD-204ENST00000417538 FHAD1B1AJZ9 1412 aa26.34■■□□□ 1.81
RHD-204ENST00000417538 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
RHD-204ENST00000417538 TOP2BQ02880 1626 aa26.24■■□□□ 1.79
RHD-204ENST00000417538 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
RHD-204ENST00000417538 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
RHD-204ENST00000417538 FAM69CQ0P6D2 419 aa26.19■■□□□ 1.78
RHD-204ENST00000417538 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms