RNA–Protein interactions for RNA: ENST00000575389.6

SALL3-205, Transcript of spalt like transcription factor 3, humanhuman

TSL 5 BASIC

Gene SALL3, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3-205ENST00000575389 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
SALL3-205ENST00000575389 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
SALL3-205ENST00000575389 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
SALL3-205ENST00000575389 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
SALL3-205ENST00000575389 PCGF6Q9BYE7 350 aa25.1■■□□□ 1.61
SALL3-205ENST00000575389 PELP1Q8IZL8 1130 aaKnown RBP25.04■■□□□ 1.6
SALL3-205ENST00000575389 EHMT2Q96KQ7 1210 aa25■■□□□ 1.59
SALL3-205ENST00000575389 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
SALL3-205ENST00000575389 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
SALL3-205ENST00000575389 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
SALL3-205ENST00000575389 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.52
SALL3-205ENST00000575389 HRCP23327 699 aa24.52■■□□□ 1.52
SALL3-205ENST00000575389 MYT1Q01538 1121 aa24.36■■□□□ 1.49
SALL3-205ENST00000575389 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
SALL3-205ENST00000575389 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
SALL3-205ENST00000575389 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
SALL3-205ENST00000575389 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
SALL3-205ENST00000575389 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
SALL3-205ENST00000575389 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
SALL3-205ENST00000575389 CCER1Q8TC90 406 aaPredicted RBP23.59■■□□□ 1.37
SALL3-205ENST00000575389 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
SALL3-205ENST00000575389 SCAF1Q9H7N4 1312 aaKnown RBP23.52■■□□□ 1.36
SALL3-205ENST00000575389 RANGAP1P46060 587 aaPredicted RBP23.49■■□□□ 1.35
SALL3-205ENST00000575389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.47■■□□□ 1.35
SALL3-205ENST00000575389 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
SALL3-205ENST00000575389 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
SALL3-205ENST00000575389 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
SALL3-205ENST00000575389 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
SALL3-205ENST00000575389 UBTFP17480 764 aaKnown RBP23.3■■□□□ 1.32
SALL3-205ENST00000575389 ABCC9O60706 1549 aa23.22■■□□□ 1.31
SALL3-205ENST00000575389 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
SALL3-205ENST00000575389 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
SALL3-205ENST00000575389 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
SALL3-205ENST00000575389 APLP2Q06481 763 aa23.02■■□□□ 1.28
SALL3-205ENST00000575389 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
SALL3-205ENST00000575389 NEUROD1Q13562 356 aa22.95■■□□□ 1.26
SALL3-205ENST00000575389 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
SALL3-205ENST00000575389 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
SALL3-205ENST00000575389 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
SALL3-205ENST00000575389 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
SALL3-205ENST00000575389 RB1CC1Q8TDY2 1594 aa22.73■■□□□ 1.23
SALL3-205ENST00000575389 ITGAEP38570 1179 aa22.65■■□□□ 1.22
SALL3-205ENST00000575389 BCL11AQ9H165 835 aa22.59■■□□□ 1.21
SALL3-205ENST00000575389 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
SALL3-205ENST00000575389 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
SALL3-205ENST00000575389 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
SALL3-205ENST00000575389 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
SALL3-205ENST00000575389 BCANQ96GW7 911 aa22.34■■□□□ 1.17
SALL3-205ENST00000575389 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
SALL3-205ENST00000575389 SOGA1O94964 1423 aa22.3■■□□□ 1.16
SALL3-205ENST00000575389 MIER1Q8N108 512 aa22.29■■□□□ 1.16
SALL3-205ENST00000575389 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
SALL3-205ENST00000575389 WIZO95785 1651 aa22.26■■□□□ 1.15
SALL3-205ENST00000575389 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
SALL3-205ENST00000575389 NEFLP07196 543 aa22.16■■□□□ 1.14
SALL3-205ENST00000575389 ANP32EQ9BTT0 268 aa22.15■■□□□ 1.14
SALL3-205ENST00000575389 NACADO15069 1562 aa22.06■■□□□ 1.12
SALL3-205ENST00000575389 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
SALL3-205ENST00000575389 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.12
SALL3-205ENST00000575389 P3H3Q8IVL6 736 aa22.01■■□□□ 1.11
SALL3-205ENST00000575389 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
SALL3-205ENST00000575389 CLIP1P30622 1438 aa22■■□□□ 1.11
SALL3-205ENST00000575389 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
SALL3-205ENST00000575389 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
SALL3-205ENST00000575389 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
SALL3-205ENST00000575389 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
SALL3-205ENST00000575389 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
SALL3-205ENST00000575389 PRKCSHP14314 528 aaPredicted RBP21.82■■□□□ 1.08
SALL3-205ENST00000575389 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
SALL3-205ENST00000575389 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
SALL3-205ENST00000575389 EEA1Q15075 1411 aa21.75■■□□□ 1.07
SALL3-205ENST00000575389 CEP164Q9UPV0 1460 aa21.69■■□□□ 1.06
SALL3-205ENST00000575389 EIF5BO60841 1220 aaKnown RBP21.69■■□□□ 1.06
SALL3-205ENST00000575389 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
SALL3-205ENST00000575389 FKBP8Q14318 412 aa21.65■■□□□ 1.06
SALL3-205ENST00000575389 TRIM52Q96A61 297 aa21.63■■□□□ 1.05
SALL3-205ENST00000575389 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
SALL3-205ENST00000575389 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
SALL3-205ENST00000575389 POLR3GLQ9BT43 218 aa21.62■■□□□ 1.05
SALL3-205ENST00000575389 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
SALL3-205ENST00000575389 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
SALL3-205ENST00000575389 VPS8Q8N3P4 1428 aa21.58■■□□□ 1.05
SALL3-205ENST00000575389 SMARCA2P51531 1590 aa21.58■■□□□ 1.04
SALL3-205ENST00000575389 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
SALL3-205ENST00000575389 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
SALL3-205ENST00000575389 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
SALL3-205ENST00000575389 KCNH8Q96L42 1107 aa21.56■■□□□ 1.04
SALL3-205ENST00000575389 NBR1Q14596 966 aa21.55■■□□□ 1.04
SALL3-205ENST00000575389 TSHZ2Q9NRE2 1034 aa21.54■■□□□ 1.04
SALL3-205ENST00000575389 ANP32CO43423 234 aa21.49■■□□□ 1.03
SALL3-205ENST00000575389 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
SALL3-205ENST00000575389 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
SALL3-205ENST00000575389 IRX6P78412 446 aaPredicted RBP21.42■■□□□ 1.02
SALL3-205ENST00000575389 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
SALL3-205ENST00000575389 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
SALL3-205ENST00000575389 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
SALL3-205ENST00000575389 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
SALL3-205ENST00000575389 KIF27Q86VH2 1401 aa21.31■■□□□ 1
SALL3-205ENST00000575389 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
SALL3-205ENST00000575389 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms