RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 NISCHQ9Y2I1 1504 aa36.09■■■■□ 3.37
CLRN1-203ENST00000328863 CCDC180Q9P1Z9 1646 aa32.26■■■□□ 2.76
CLRN1-203ENST00000328863 ABCC9O60706 1549 aa31.34■■■□□ 2.61
CLRN1-203ENST00000328863 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
CLRN1-203ENST00000328863 NACADO15069 1562 aa30.23■■■□□ 2.43
CLRN1-203ENST00000328863 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
CLRN1-203ENST00000328863 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
CLRN1-203ENST00000328863 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
CLRN1-203ENST00000328863 DCAF1Q9Y4B6 1507 aa29.93■■■□□ 2.38
CLRN1-203ENST00000328863 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
CLRN1-203ENST00000328863 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
CLRN1-203ENST00000328863 BICRAQ9NZM4 1560 aa29.28■■■□□ 2.28
CLRN1-203ENST00000328863 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
CLRN1-203ENST00000328863 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
CLRN1-203ENST00000328863 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
CLRN1-203ENST00000328863 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
CLRN1-203ENST00000328863 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
CLRN1-203ENST00000328863 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
CLRN1-203ENST00000328863 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
CLRN1-203ENST00000328863 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
CLRN1-203ENST00000328863 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
CLRN1-203ENST00000328863 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.04
CLRN1-203ENST00000328863 PEG3Q9GZU2 1588 aa27.81■■■□□ 2.04
CLRN1-203ENST00000328863 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
CLRN1-203ENST00000328863 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
CLRN1-203ENST00000328863 MROH2BQ7Z745 1585 aa27.78■■■□□ 2.04
CLRN1-203ENST00000328863 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
CLRN1-203ENST00000328863 WIZO95785 1651 aa27.53■■■□□ 2
CLRN1-203ENST00000328863 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
CLRN1-203ENST00000328863 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
CLRN1-203ENST00000328863 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
CLRN1-203ENST00000328863 NESP48681 1621 aa27.1■■□□□ 1.93
CLRN1-203ENST00000328863 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
CLRN1-203ENST00000328863 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
CLRN1-203ENST00000328863 KIF21AQ7Z4S6 1674 aa26.94■■□□□ 1.9
CLRN1-203ENST00000328863 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
CLRN1-203ENST00000328863 PRDM2Q13029 1718 aa26.89■■□□□ 1.9
CLRN1-203ENST00000328863 CFTRP13569 1480 aa26.86■■□□□ 1.89
CLRN1-203ENST00000328863 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
CLRN1-203ENST00000328863 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
CLRN1-203ENST00000328863 CUX2O14529 1486 aa26.81■■□□□ 1.88
CLRN1-203ENST00000328863 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
CLRN1-203ENST00000328863 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
CLRN1-203ENST00000328863 MRC2Q9UBG0 1479 aa26.68■■□□□ 1.86
CLRN1-203ENST00000328863 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
CLRN1-203ENST00000328863 WDR62O43379 1518 aa26.63■■□□□ 1.85
CLRN1-203ENST00000328863 DNAJC5Q9H3Z4 198 aa26.57■■□□□ 1.84
CLRN1-203ENST00000328863 URB2Q14146 1524 aaKnown RBP26.43■■□□□ 1.82
CLRN1-203ENST00000328863 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
CLRN1-203ENST00000328863 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
CLRN1-203ENST00000328863 TOPBP1Q92547 1522 aa26.3■■□□□ 1.8
CLRN1-203ENST00000328863 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
CLRN1-203ENST00000328863 CUX1P39880 1505 aa26.09■■□□□ 1.77
CLRN1-203ENST00000328863 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
CLRN1-203ENST00000328863 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
CLRN1-203ENST00000328863 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
CLRN1-203ENST00000328863 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
CLRN1-203ENST00000328863 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
CLRN1-203ENST00000328863 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
CLRN1-203ENST00000328863 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
CLRN1-203ENST00000328863 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
CLRN1-203ENST00000328863 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
CLRN1-203ENST00000328863 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
CLRN1-203ENST00000328863 RAD54L2Q9Y4B4 1467 aa25.9■■□□□ 1.74
CLRN1-203ENST00000328863 SOGA1O94964 1423 aa25.89■■□□□ 1.74
CLRN1-203ENST00000328863 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
CLRN1-203ENST00000328863 AQRO60306 1485 aaKnown RBP eCLIP25.77■■□□□ 1.72
CLRN1-203ENST00000328863 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
CLRN1-203ENST00000328863 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
CLRN1-203ENST00000328863 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
CLRN1-203ENST00000328863 CHD1O14646 1710 aa25.68■■□□□ 1.7
CLRN1-203ENST00000328863 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
CLRN1-203ENST00000328863 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
CLRN1-203ENST00000328863 SNAPC4Q5SXM2 1469 aa25.65■■□□□ 1.7
CLRN1-203ENST00000328863 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
CLRN1-203ENST00000328863 OSCARQ8IYS5 282 aa25.53■■□□□ 1.68
CLRN1-203ENST00000328863 SYNJ2O15056 1496 aa25.52■■□□□ 1.68
CLRN1-203ENST00000328863 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
CLRN1-203ENST00000328863 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
CLRN1-203ENST00000328863 FBLN2P98095 1184 aa25.43■■□□□ 1.66
CLRN1-203ENST00000328863 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
CLRN1-203ENST00000328863 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
CLRN1-203ENST00000328863 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
CLRN1-203ENST00000328863 CUL7Q14999 1698 aa25.36■■□□□ 1.65
CLRN1-203ENST00000328863 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
CLRN1-203ENST00000328863 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
CLRN1-203ENST00000328863 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
CLRN1-203ENST00000328863 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
CLRN1-203ENST00000328863 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
CLRN1-203ENST00000328863 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
CLRN1-203ENST00000328863 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
CLRN1-203ENST00000328863 NUP160Q12769 1436 aa25.22■■□□□ 1.63
CLRN1-203ENST00000328863 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
CLRN1-203ENST00000328863 IGF1RP08069 1367 aa25.16■■□□□ 1.62
CLRN1-203ENST00000328863 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
CLRN1-203ENST00000328863 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
CLRN1-203ENST00000328863 CARMIL1Q5VZK9 1371 aa25.06■■□□□ 1.6
CLRN1-203ENST00000328863 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
CLRN1-203ENST00000328863 RAPGEF2Q9Y4G8 1499 aa24.99■■□□□ 1.59
CLRN1-203ENST00000328863 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms