RNA–Protein interactions for RNA: ENST00000378378.8

ARHGEF16-203, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF16, Length 3,061 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-203ENST00000378378 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
ARHGEF16-203ENST00000378378 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
ARHGEF16-203ENST00000378378 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
ARHGEF16-203ENST00000378378 DCAF8L2P0C7V8 631 aa25.71■■□□□ 1.71
ARHGEF16-203ENST00000378378 HRCP23327 699 aa25.58■■□□□ 1.69
ARHGEF16-203ENST00000378378 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
ARHGEF16-203ENST00000378378 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
ARHGEF16-203ENST00000378378 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
ARHGEF16-203ENST00000378378 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
ARHGEF16-203ENST00000378378 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
ARHGEF16-203ENST00000378378 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
ARHGEF16-203ENST00000378378 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
ARHGEF16-203ENST00000378378 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
ARHGEF16-203ENST00000378378 TRIM26Q12899 539 aaPredicted RBP24.31■■□□□ 1.48
ARHGEF16-203ENST00000378378 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
ARHGEF16-203ENST00000378378 DCAF1Q9Y4B6 1507 aa24.23■■□□□ 1.47
ARHGEF16-203ENST00000378378 ABCC9O60706 1549 aa24.16■■□□□ 1.46
ARHGEF16-203ENST00000378378 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
ARHGEF16-203ENST00000378378 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
ARHGEF16-203ENST00000378378 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
ARHGEF16-203ENST00000378378 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
ARHGEF16-203ENST00000378378 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
ARHGEF16-203ENST00000378378 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
ARHGEF16-203ENST00000378378 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
ARHGEF16-203ENST00000378378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF16-203ENST00000378378 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
ARHGEF16-203ENST00000378378 GTF3C3Q9Y5Q9 886 aa23.58■■□□□ 1.37
ARHGEF16-203ENST00000378378 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
ARHGEF16-203ENST00000378378 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF16-203ENST00000378378 NACADO15069 1562 aa23.47■■□□□ 1.35
ARHGEF16-203ENST00000378378 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF16-203ENST00000378378 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
ARHGEF16-203ENST00000378378 DIEXFQ68CQ4 756 aaKnown RBP23.35■■□□□ 1.33
ARHGEF16-203ENST00000378378 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
ARHGEF16-203ENST00000378378 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.328e-8■■■□□ 14.7
ARHGEF16-203ENST00000378378 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
ARHGEF16-203ENST00000378378 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF16-203ENST00000378378 WIZO95785 1651 aa23.17■■□□□ 1.3
ARHGEF16-203ENST00000378378 MYT1Q01538 1121 aa22.99■■□□□ 1.27
ARHGEF16-203ENST00000378378 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF16-203ENST00000378378 MIER1Q8N108 512 aa22.87■■□□□ 1.25
ARHGEF16-203ENST00000378378 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
ARHGEF16-203ENST00000378378 UNC13AQ9UPW8 1703 aa22.8■■□□□ 1.24
ARHGEF16-203ENST00000378378 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
ARHGEF16-203ENST00000378378 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
ARHGEF16-203ENST00000378378 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
ARHGEF16-203ENST00000378378 CCDC88BA6NC98 1476 aa22.73■■□□□ 1.23
ARHGEF16-203ENST00000378378 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
ARHGEF16-203ENST00000378378 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
ARHGEF16-203ENST00000378378 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
ARHGEF16-203ENST00000378378 SOGA1O94964 1423 aa22.58■■□□□ 1.21
ARHGEF16-203ENST00000378378 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
ARHGEF16-203ENST00000378378 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
ARHGEF16-203ENST00000378378 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
ARHGEF16-203ENST00000378378 CEP162Q5TB80 1403 aa22.47■■□□□ 1.19
ARHGEF16-203ENST00000378378 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
ARHGEF16-203ENST00000378378 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
ARHGEF16-203ENST00000378378 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
ARHGEF16-203ENST00000378378 ATAD2BQ9ULI0 1458 aa22.32■■□□□ 1.16
ARHGEF16-203ENST00000378378 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
ARHGEF16-203ENST00000378378 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
ARHGEF16-203ENST00000378378 BCANQ96GW7 911 aa22.25■■□□□ 1.15
ARHGEF16-203ENST00000378378 TSHZ2Q9NRE2 1034 aa22.25■■□□□ 1.15
ARHGEF16-203ENST00000378378 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
ARHGEF16-203ENST00000378378 KCNH8Q96L42 1107 aa22.17■■□□□ 1.14
ARHGEF16-203ENST00000378378 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
ARHGEF16-203ENST00000378378 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
ARHGEF16-203ENST00000378378 BCL11AQ9H165 835 aa22.11■■□□□ 1.13
ARHGEF16-203ENST00000378378 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
ARHGEF16-203ENST00000378378 APLP2Q06481 763 aa22.04■■□□□ 1.12
ARHGEF16-203ENST00000378378 EEA1Q15075 1411 aa21.98■■□□□ 1.11
ARHGEF16-203ENST00000378378 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
ARHGEF16-203ENST00000378378 ITGAEP38570 1179 aa21.92■■□□□ 1.1
ARHGEF16-203ENST00000378378 FKBP8Q14318 412 aa21.92■■□□□ 1.1
ARHGEF16-203ENST00000378378 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
ARHGEF16-203ENST00000378378 CLIP1P30622 1438 aa21.89■■□□□ 1.09
ARHGEF16-203ENST00000378378 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
ARHGEF16-203ENST00000378378 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
ARHGEF16-203ENST00000378378 NCAPD3P42695 1498 aa21.83■■□□□ 1.09
ARHGEF16-203ENST00000378378 KANK4Q5T7N3 995 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF16-203ENST00000378378 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF16-203ENST00000378378 CLSPNQ9HAW4 1339 aa21.77■■□□□ 1.08
ARHGEF16-203ENST00000378378 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
ARHGEF16-203ENST00000378378 RBM19Q9Y4C8 960 aaKnown RBP21.74■■□□□ 1.07
ARHGEF16-203ENST00000378378 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
ARHGEF16-203ENST00000378378 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
ARHGEF16-203ENST00000378378 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
ARHGEF16-203ENST00000378378 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
ARHGEF16-203ENST00000378378 CUX1P39880 1505 aa21.68■■□□□ 1.06
ARHGEF16-203ENST00000378378 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
ARHGEF16-203ENST00000378378 ATP1B4Q9UN42 357 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF16-203ENST00000378378 KIF21BO75037 1637 aa21.64■■□□□ 1.06
ARHGEF16-203ENST00000378378 CFTRP13569 1480 aa21.64■■□□□ 1.05
ARHGEF16-203ENST00000378378 MSH5O43196 834 aa21.61■■□□□ 1.05
ARHGEF16-203ENST00000378378 IRX6P78412 446 aaPredicted RBP21.59■■□□□ 1.05
ARHGEF16-203ENST00000378378 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
ARHGEF16-203ENST00000378378 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.04
ARHGEF16-203ENST00000378378 NEFLP07196 543 aa21.57■■□□□ 1.04
ARHGEF16-203ENST00000378378 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
ARHGEF16-203ENST00000378378 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms