RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
CCHCR1-208ENST00000451521 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
CCHCR1-208ENST00000451521 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
CCHCR1-208ENST00000451521 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CCHCR1-208ENST00000451521 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
CCHCR1-208ENST00000451521 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
CCHCR1-208ENST00000451521 ABCC9O60706 1549 aa27.29■■□□□ 1.96
CCHCR1-208ENST00000451521 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
CCHCR1-208ENST00000451521 NACADO15069 1562 aa26.8■■□□□ 1.88
CCHCR1-208ENST00000451521 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
CCHCR1-208ENST00000451521 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
CCHCR1-208ENST00000451521 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
CCHCR1-208ENST00000451521 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
CCHCR1-208ENST00000451521 UNC13AQ9UPW8 1703 aa26.01■■□□□ 1.75
CCHCR1-208ENST00000451521 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
CCHCR1-208ENST00000451521 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
CCHCR1-208ENST00000451521 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
CCHCR1-208ENST00000451521 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
CCHCR1-208ENST00000451521 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
CCHCR1-208ENST00000451521 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.7
CCHCR1-208ENST00000451521 WIZO95785 1651 aa25.68■■□□□ 1.7
CCHCR1-208ENST00000451521 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
CCHCR1-208ENST00000451521 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
CCHCR1-208ENST00000451521 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
CCHCR1-208ENST00000451521 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
CCHCR1-208ENST00000451521 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
CCHCR1-208ENST00000451521 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
CCHCR1-208ENST00000451521 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
CCHCR1-208ENST00000451521 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CCHCR1-208ENST00000451521 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
CCHCR1-208ENST00000451521 HRCP23327 699 aa24.92■■□□□ 1.58
CCHCR1-208ENST00000451521 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
CCHCR1-208ENST00000451521 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
CCHCR1-208ENST00000451521 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
CCHCR1-208ENST00000451521 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
CCHCR1-208ENST00000451521 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
CCHCR1-208ENST00000451521 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CCHCR1-208ENST00000451521 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
CCHCR1-208ENST00000451521 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
CCHCR1-208ENST00000451521 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
CCHCR1-208ENST00000451521 EEA1Q15075 1411 aa24.46■■□□□ 1.51
CCHCR1-208ENST00000451521 SOGA1O94964 1423 aa24.43■■□□□ 1.5
CCHCR1-208ENST00000451521 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
CCHCR1-208ENST00000451521 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
CCHCR1-208ENST00000451521 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
CCHCR1-208ENST00000451521 CFTRP13569 1480 aa24.34■■□□□ 1.49
CCHCR1-208ENST00000451521 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
CCHCR1-208ENST00000451521 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
CCHCR1-208ENST00000451521 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
CCHCR1-208ENST00000451521 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
CCHCR1-208ENST00000451521 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
CCHCR1-208ENST00000451521 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
CCHCR1-208ENST00000451521 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
CCHCR1-208ENST00000451521 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
CCHCR1-208ENST00000451521 CUX1P39880 1505 aa24.14■■□□□ 1.46
CCHCR1-208ENST00000451521 KIF21BO75037 1637 aa24.14■■□□□ 1.46
CCHCR1-208ENST00000451521 GOLGA3Q08378 1498 aa24.14■■□□□ 1.45
CCHCR1-208ENST00000451521 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
CCHCR1-208ENST00000451521 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
CCHCR1-208ENST00000451521 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
CCHCR1-208ENST00000451521 NESP48681 1621 aa24.04■■□□□ 1.44
CCHCR1-208ENST00000451521 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
CCHCR1-208ENST00000451521 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
CCHCR1-208ENST00000451521 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
CCHCR1-208ENST00000451521 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
CCHCR1-208ENST00000451521 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
CCHCR1-208ENST00000451521 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
CCHCR1-208ENST00000451521 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
CCHCR1-208ENST00000451521 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
CCHCR1-208ENST00000451521 CLIP1P30622 1438 aa23.77■■□□□ 1.4
CCHCR1-208ENST00000451521 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
CCHCR1-208ENST00000451521 CUX2O14529 1486 aa23.71■■□□□ 1.39
CCHCR1-208ENST00000451521 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
CCHCR1-208ENST00000451521 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
CCHCR1-208ENST00000451521 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CCHCR1-208ENST00000451521 VPS8Q8N3P4 1428 aa23.64■■□□□ 1.38
CCHCR1-208ENST00000451521 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
CCHCR1-208ENST00000451521 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
CCHCR1-208ENST00000451521 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
CCHCR1-208ENST00000451521 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.36
CCHCR1-208ENST00000451521 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
CCHCR1-208ENST00000451521 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
CCHCR1-208ENST00000451521 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
CCHCR1-208ENST00000451521 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
CCHCR1-208ENST00000451521 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
CCHCR1-208ENST00000451521 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
CCHCR1-208ENST00000451521 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
CCHCR1-208ENST00000451521 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
CCHCR1-208ENST00000451521 CUL7Q14999 1698 aa23.41■■□□□ 1.34
CCHCR1-208ENST00000451521 ARHGAP35Q9NRY4 1499 aa23.41■■□□□ 1.34
CCHCR1-208ENST00000451521 MYT1Q01538 1121 aa23.4■■□□□ 1.34
CCHCR1-208ENST00000451521 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
CCHCR1-208ENST00000451521 APLP2Q06481 763 aa23.35■■□□□ 1.33
CCHCR1-208ENST00000451521 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
CCHCR1-208ENST00000451521 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-208ENST00000451521 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
CCHCR1-208ENST00000451521 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
CCHCR1-208ENST00000451521 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
CCHCR1-208ENST00000451521 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
CCHCR1-208ENST00000451521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms