RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
CCHCR1-208ENST00000451521 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
CCHCR1-208ENST00000451521 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
CCHCR1-208ENST00000451521 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
CCHCR1-208ENST00000451521 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
CCHCR1-208ENST00000451521 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
CCHCR1-208ENST00000451521 ABCC9O60706 1549 aa27.29■■□□□ 1.96
CCHCR1-208ENST00000451521 MYO15BQ96JP2 1530 aa27.13■■□□□ 1.93
CCHCR1-208ENST00000451521 NACADO15069 1562 aa26.8■■□□□ 1.88
CCHCR1-208ENST00000451521 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
CCHCR1-208ENST00000451521 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
CCHCR1-208ENST00000451521 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
CCHCR1-208ENST00000451521 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
CCHCR1-208ENST00000451521 UNC13AQ9UPW8 1703 aa26.01■■□□□ 1.75
CCHCR1-208ENST00000451521 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.74
CCHCR1-208ENST00000451521 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
CCHCR1-208ENST00000451521 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
CCHCR1-208ENST00000451521 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
CCHCR1-208ENST00000451521 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
CCHCR1-208ENST00000451521 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.7
CCHCR1-208ENST00000451521 WIZO95785 1651 aa25.68■■□□□ 1.7
CCHCR1-208ENST00000451521 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
CCHCR1-208ENST00000451521 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
CCHCR1-208ENST00000451521 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
CCHCR1-208ENST00000451521 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
CCHCR1-208ENST00000451521 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
CCHCR1-208ENST00000451521 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
CCHCR1-208ENST00000451521 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
CCHCR1-208ENST00000451521 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
CCHCR1-208ENST00000451521 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
CCHCR1-208ENST00000451521 HRCP23327 699 aa24.92■■□□□ 1.58
CCHCR1-208ENST00000451521 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
CCHCR1-208ENST00000451521 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
CCHCR1-208ENST00000451521 HMGXB3Q12766 1538 aa24.75■■□□□ 1.55
CCHCR1-208ENST00000451521 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
CCHCR1-208ENST00000451521 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
CCHCR1-208ENST00000451521 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CCHCR1-208ENST00000451521 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
CCHCR1-208ENST00000451521 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
CCHCR1-208ENST00000451521 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
CCHCR1-208ENST00000451521 EEA1Q15075 1411 aa24.46■■□□□ 1.51
CCHCR1-208ENST00000451521 SOGA1O94964 1423 aa24.43■■□□□ 1.5
CCHCR1-208ENST00000451521 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
CCHCR1-208ENST00000451521 PPARGC1BQ86YN6 1023 aaKnown RBP24.35■■□□□ 1.49
CCHCR1-208ENST00000451521 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
CCHCR1-208ENST00000451521 CFTRP13569 1480 aa24.34■■□□□ 1.49
CCHCR1-208ENST00000451521 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
CCHCR1-208ENST00000451521 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
CCHCR1-208ENST00000451521 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
CCHCR1-208ENST00000451521 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
CCHCR1-208ENST00000451521 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
CCHCR1-208ENST00000451521 PELP1Q8IZL8 1130 aaKnown RBP24.25■■□□□ 1.47
CCHCR1-208ENST00000451521 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
CCHCR1-208ENST00000451521 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
CCHCR1-208ENST00000451521 CUX1P39880 1505 aa24.14■■□□□ 1.46
CCHCR1-208ENST00000451521 KIF21BO75037 1637 aa24.14■■□□□ 1.46
CCHCR1-208ENST00000451521 GOLGA3Q08378 1498 aa24.14■■□□□ 1.45
CCHCR1-208ENST00000451521 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
CCHCR1-208ENST00000451521 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
CCHCR1-208ENST00000451521 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
CCHCR1-208ENST00000451521 NESP48681 1621 aa24.04■■□□□ 1.44
CCHCR1-208ENST00000451521 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
CCHCR1-208ENST00000451521 RAPGEF2Q9Y4G8 1499 aa23.9■■□□□ 1.42
CCHCR1-208ENST00000451521 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
CCHCR1-208ENST00000451521 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
CCHCR1-208ENST00000451521 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
CCHCR1-208ENST00000451521 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
CCHCR1-208ENST00000451521 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
CCHCR1-208ENST00000451521 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
CCHCR1-208ENST00000451521 CLIP1P30622 1438 aa23.77■■□□□ 1.4
CCHCR1-208ENST00000451521 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
CCHCR1-208ENST00000451521 CUX2O14529 1486 aa23.71■■□□□ 1.39
CCHCR1-208ENST00000451521 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
CCHCR1-208ENST00000451521 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
CCHCR1-208ENST00000451521 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CCHCR1-208ENST00000451521 VPS8Q8N3P4 1428 aa23.64■■□□□ 1.38
CCHCR1-208ENST00000451521 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
CCHCR1-208ENST00000451521 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
CCHCR1-208ENST00000451521 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
CCHCR1-208ENST00000451521 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.36
CCHCR1-208ENST00000451521 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
CCHCR1-208ENST00000451521 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
CCHCR1-208ENST00000451521 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
CCHCR1-208ENST00000451521 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
CCHCR1-208ENST00000451521 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
CCHCR1-208ENST00000451521 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
CCHCR1-208ENST00000451521 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
CCHCR1-208ENST00000451521 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
CCHCR1-208ENST00000451521 CUL7Q14999 1698 aa23.41■■□□□ 1.34
CCHCR1-208ENST00000451521 ARHGAP35Q9NRY4 1499 aa23.41■■□□□ 1.34
CCHCR1-208ENST00000451521 MYT1Q01538 1121 aa23.4■■□□□ 1.34
CCHCR1-208ENST00000451521 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
CCHCR1-208ENST00000451521 APLP2Q06481 763 aa23.35■■□□□ 1.33
CCHCR1-208ENST00000451521 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
CCHCR1-208ENST00000451521 TARBP1Q13395 1621 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-208ENST00000451521 MRC2Q9UBG0 1479 aa23.28■■□□□ 1.32
CCHCR1-208ENST00000451521 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
CCHCR1-208ENST00000451521 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
CCHCR1-208ENST00000451521 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
CCHCR1-208ENST00000451521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms