RNA–Protein interactions for RNA: ENST00000401068.1

RSPO1-202, Transcript of R-spondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO1, Length 2,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-202ENST00000401068 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
RSPO1-202ENST00000401068 CCDC180Q9P1Z9 1646 aa30.08■■■□□ 2.41
RSPO1-202ENST00000401068 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
RSPO1-202ENST00000401068 DCAF1Q9Y4B6 1507 aa28.51■■■□□ 2.16
RSPO1-202ENST00000401068 ABCC9O60706 1549 aa28.45■■■□□ 2.14
RSPO1-202ENST00000401068 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
RSPO1-202ENST00000401068 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
RSPO1-202ENST00000401068 NACADO15069 1562 aa28.06■■■□□ 2.08
RSPO1-202ENST00000401068 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.04
RSPO1-202ENST00000401068 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
RSPO1-202ENST00000401068 SCRIBQ14160 1630 aa27.52■■■□□ 2
RSPO1-202ENST00000401068 UNC13AQ9UPW8 1703 aa27.18■■□□□ 1.94
RSPO1-202ENST00000401068 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.9
RSPO1-202ENST00000401068 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
RSPO1-202ENST00000401068 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
RSPO1-202ENST00000401068 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
RSPO1-202ENST00000401068 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
RSPO1-202ENST00000401068 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
RSPO1-202ENST00000401068 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
RSPO1-202ENST00000401068 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
RSPO1-202ENST00000401068 WIZO95785 1651 aa26.25■■□□□ 1.79
RSPO1-202ENST00000401068 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
RSPO1-202ENST00000401068 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
RSPO1-202ENST00000401068 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
RSPO1-202ENST00000401068 ATAD2BQ9ULI0 1458 aa26.05■■□□□ 1.76
RSPO1-202ENST00000401068 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
RSPO1-202ENST00000401068 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
RSPO1-202ENST00000401068 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
RSPO1-202ENST00000401068 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
RSPO1-202ENST00000401068 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
RSPO1-202ENST00000401068 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
RSPO1-202ENST00000401068 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
RSPO1-202ENST00000401068 CFTRP13569 1480 aa25.27■■□□□ 1.64
RSPO1-202ENST00000401068 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.63
RSPO1-202ENST00000401068 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.62
RSPO1-202ENST00000401068 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
RSPO1-202ENST00000401068 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
RSPO1-202ENST00000401068 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
RSPO1-202ENST00000401068 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
RSPO1-202ENST00000401068 LAMC3Q9Y6N6 1575 aa25.03■■□□□ 1.6
RSPO1-202ENST00000401068 NESP48681 1621 aa24.92■■□□□ 1.58
RSPO1-202ENST00000401068 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
RSPO1-202ENST00000401068 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
RSPO1-202ENST00000401068 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
RSPO1-202ENST00000401068 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
RSPO1-202ENST00000401068 PDS5BQ9NTI5 1447 aa24.84■■□□□ 1.57
RSPO1-202ENST00000401068 CUX1P39880 1505 aa24.8■■□□□ 1.56
RSPO1-202ENST00000401068 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
RSPO1-202ENST00000401068 EEA1Q15075 1411 aa24.67■■□□□ 1.54
RSPO1-202ENST00000401068 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
RSPO1-202ENST00000401068 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
RSPO1-202ENST00000401068 SOGA1O94964 1423 aa24.62■■□□□ 1.53
RSPO1-202ENST00000401068 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
RSPO1-202ENST00000401068 FAM9AQ8IZU1 332 aaPredicted RBP24.58■■□□□ 1.53
RSPO1-202ENST00000401068 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
RSPO1-202ENST00000401068 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
RSPO1-202ENST00000401068 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
RSPO1-202ENST00000401068 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
RSPO1-202ENST00000401068 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
RSPO1-202ENST00000401068 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
RSPO1-202ENST00000401068 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
RSPO1-202ENST00000401068 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
RSPO1-202ENST00000401068 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
RSPO1-202ENST00000401068 WDR62O43379 1518 aa24.39■■□□□ 1.5
RSPO1-202ENST00000401068 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
RSPO1-202ENST00000401068 CUX2O14529 1486 aa24.36■■□□□ 1.49
RSPO1-202ENST00000401068 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
RSPO1-202ENST00000401068 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
RSPO1-202ENST00000401068 KIF21BO75037 1637 aa24.31■■□□□ 1.48
RSPO1-202ENST00000401068 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
RSPO1-202ENST00000401068 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
RSPO1-202ENST00000401068 TARBP1Q13395 1621 aaKnown RBP24.25■■□□□ 1.47
RSPO1-202ENST00000401068 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
RSPO1-202ENST00000401068 IGF1RP08069 1367 aa24.22■■□□□ 1.47
RSPO1-202ENST00000401068 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
RSPO1-202ENST00000401068 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
RSPO1-202ENST00000401068 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
RSPO1-202ENST00000401068 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
RSPO1-202ENST00000401068 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
RSPO1-202ENST00000401068 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.45
RSPO1-202ENST00000401068 TDRD9Q8NDG6 1382 aaKnown RBP24.13■■□□□ 1.45
RSPO1-202ENST00000401068 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
RSPO1-202ENST00000401068 UBTFP17480 764 aaKnown RBP24.09■■□□□ 1.45
RSPO1-202ENST00000401068 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
RSPO1-202ENST00000401068 CUL7Q14999 1698 aa24.07■■□□□ 1.44
RSPO1-202ENST00000401068 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.43
RSPO1-202ENST00000401068 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
RSPO1-202ENST00000401068 CEP162Q5TB80 1403 aa23.98■■□□□ 1.43
RSPO1-202ENST00000401068 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
RSPO1-202ENST00000401068 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
RSPO1-202ENST00000401068 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
RSPO1-202ENST00000401068 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
RSPO1-202ENST00000401068 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
RSPO1-202ENST00000401068 CLIP1P30622 1438 aa23.84■■□□□ 1.41
RSPO1-202ENST00000401068 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
RSPO1-202ENST00000401068 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
RSPO1-202ENST00000401068 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
RSPO1-202ENST00000401068 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
RSPO1-202ENST00000401068 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
RSPO1-202ENST00000401068 ARHGAP35Q9NRY4 1499 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms