RNA–Protein interactions for RNA: ENST00000300843.8

MARK4-202, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 5,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-202ENST00000300843 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
MARK4-202ENST00000300843 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
MARK4-202ENST00000300843 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
MARK4-202ENST00000300843 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
MARK4-202ENST00000300843 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
MARK4-202ENST00000300843 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
MARK4-202ENST00000300843 APLP2Q06481 763 aa24.1■■□□□ 1.45
MARK4-202ENST00000300843 TRIM41Q8WV44 630 aa23.69■■□□□ 1.38
MARK4-202ENST00000300843 PELP1Q8IZL8 1130 aaKnown RBP23.68■■□□□ 1.38
MARK4-202ENST00000300843 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
MARK4-202ENST00000300843 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
MARK4-202ENST00000300843 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
MARK4-202ENST00000300843 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
MARK4-202ENST00000300843 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
MARK4-202ENST00000300843 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
MARK4-202ENST00000300843 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
MARK4-202ENST00000300843 MYT1Q01538 1121 aa23.15■■□□□ 1.3
MARK4-202ENST00000300843 CENPBP07199 599 aaPredicted RBP22.94■■□□□ 1.26
MARK4-202ENST00000300843 ABCC9O60706 1549 aa22.85■■□□□ 1.25
MARK4-202ENST00000300843 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
MARK4-202ENST00000300843 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
MARK4-202ENST00000300843 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
MARK4-202ENST00000300843 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
MARK4-202ENST00000300843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.19
MARK4-202ENST00000300843 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.19
MARK4-202ENST00000300843 ERICH6Q7L0X2 663 aa22.51■■□□□ 1.19
MARK4-202ENST00000300843 ITGAEP38570 1179 aa22.46■■□□□ 1.19
MARK4-202ENST00000300843 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
MARK4-202ENST00000300843 NEFLP07196 543 aa22.45■■□□□ 1.18
MARK4-202ENST00000300843 YTHDC1Q96MU7 727 aaKnown RBP22.41■■□□□ 1.18
MARK4-202ENST00000300843 HRCP23327 699 aa22.35■■□□□ 1.17
MARK4-202ENST00000300843 MYT1LQ9UL68 1186 aa22.34■■□□□ 1.17
MARK4-202ENST00000300843 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
MARK4-202ENST00000300843 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
MARK4-202ENST00000300843 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
MARK4-202ENST00000300843 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
MARK4-202ENST00000300843 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
MARK4-202ENST00000300843 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
MARK4-202ENST00000300843 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
MARK4-202ENST00000300843 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
MARK4-202ENST00000300843 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
MARK4-202ENST00000300843 FBLN2P98095 1184 aa21.76■■□□□ 1.07
MARK4-202ENST00000300843 DAXXQ9UER7 740 aaPredicted RBP21.75■■□□□ 1.07
MARK4-202ENST00000300843 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
MARK4-202ENST00000300843 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
MARK4-202ENST00000300843 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
MARK4-202ENST00000300843 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
MARK4-202ENST00000300843 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
MARK4-202ENST00000300843 ZNF326Q5BKZ1 582 aaKnown RBP21.5■■□□□ 1.03
MARK4-202ENST00000300843 CDK11AQ9UQ88 783 aaPredicted RBP21.46■■□□□ 1.03
MARK4-202ENST00000300843 ANP32CO43423 234 aa21.46■■□□□ 1.03
MARK4-202ENST00000300843 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
MARK4-202ENST00000300843 ESF1Q9H501 851 aaKnown RBP21.42■■□□□ 1.02
MARK4-202ENST00000300843 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
MARK4-202ENST00000300843 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
MARK4-202ENST00000300843 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1.01
MARK4-202ENST00000300843 NACADO15069 1562 aa21.3■■□□□ 1
MARK4-202ENST00000300843 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
MARK4-202ENST00000300843 GTF3C3Q9Y5Q9 886 aa21.13■□□□□ 0.97
MARK4-202ENST00000300843 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
MARK4-202ENST00000300843 BCANQ96GW7 911 aa21.12■□□□□ 0.97
MARK4-202ENST00000300843 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
MARK4-202ENST00000300843 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
MARK4-202ENST00000300843 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
MARK4-202ENST00000300843 NEFMP07197 916 aa21.07■□□□□ 0.96
MARK4-202ENST00000300843 EEA1Q15075 1411 aa21.03■□□□□ 0.96
MARK4-202ENST00000300843 CLIP1P30622 1438 aa21.02■□□□□ 0.96
MARK4-202ENST00000300843 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
MARK4-202ENST00000300843 CANXP27824 592 aaKnown RBP21■□□□□ 0.95
MARK4-202ENST00000300843 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
MARK4-202ENST00000300843 CHIC2Q9UKJ5 165 aa20.97■□□□□ 0.95
MARK4-202ENST00000300843 BAZ1BQ9UIG0 1483 aaKnown RBP20.95■□□□□ 0.94
MARK4-202ENST00000300843 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
MARK4-202ENST00000300843 TSPY4P0CV99 314 aa20.94■□□□□ 0.94
MARK4-202ENST00000300843 TSPY10P0CW01 314 aa20.94■□□□□ 0.94
MARK4-202ENST00000300843 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
MARK4-202ENST00000300843 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
MARK4-202ENST00000300843 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
MARK4-202ENST00000300843 STAG3Q9UJ98 1225 aa20.91■□□□□ 0.94
MARK4-202ENST00000300843 SLC24A1O60721 1099 aa20.89■□□□□ 0.93
MARK4-202ENST00000300843 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
MARK4-202ENST00000300843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.93
MARK4-202ENST00000300843 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
MARK4-202ENST00000300843 CEP162Q5TB80 1403 aa20.83■□□□□ 0.92
MARK4-202ENST00000300843 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
MARK4-202ENST00000300843 KIF27Q86VH2 1401 aa20.81■□□□□ 0.92
MARK4-202ENST00000300843 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
MARK4-202ENST00000300843 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
MARK4-202ENST00000300843 TNIKQ9UKE5 1360 aa20.74■□□□□ 0.91
MARK4-202ENST00000300843 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
MARK4-202ENST00000300843 PLEKHD1A6NEE1 506 aa20.73■□□□□ 0.91
MARK4-202ENST00000300843 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
MARK4-202ENST00000300843 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
MARK4-202ENST00000300843 KDM2AQ9Y2K7 1162 aa20.7■□□□□ 0.9
MARK4-202ENST00000300843 RRP7BPQ9NSQ0 103 aa20.69■□□□□ 0.9
MARK4-202ENST00000300843 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
MARK4-202ENST00000300843 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
MARK4-202ENST00000300843 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
MARK4-202ENST00000300843 FKBP8Q14318 412 aa20.65■□□□□ 0.9
MARK4-202ENST00000300843 ANP32AP39687 249 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms