RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 NISCHQ9Y2I1 1504 aa31.53■■■□□ 2.64
SNX11-202ENST00000393405 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
SNX11-202ENST00000393405 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
SNX11-202ENST00000393405 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
SNX11-202ENST00000393405 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
SNX11-202ENST00000393405 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
SNX11-202ENST00000393405 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
SNX11-202ENST00000393405 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
SNX11-202ENST00000393405 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
SNX11-202ENST00000393405 HRCP23327 699 aa25.36■■□□□ 1.65
SNX11-202ENST00000393405 ABCC9O60706 1549 aa25.18■■□□□ 1.62
SNX11-202ENST00000393405 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
SNX11-202ENST00000393405 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.58
SNX11-202ENST00000393405 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
SNX11-202ENST00000393405 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
SNX11-202ENST00000393405 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
SNX11-202ENST00000393405 NACADO15069 1562 aa24.77■■□□□ 1.56
SNX11-202ENST00000393405 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
SNX11-202ENST00000393405 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
SNX11-202ENST00000393405 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
SNX11-202ENST00000393405 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SNX11-202ENST00000393405 PELP1Q8IZL8 1130 aaKnown RBP24.48■■□□□ 1.51
SNX11-202ENST00000393405 WIZO95785 1651 aa24.41■■□□□ 1.5
SNX11-202ENST00000393405 TRIM26Q12899 539 aaPredicted RBP24.38■■□□□ 1.49
SNX11-202ENST00000393405 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
SNX11-202ENST00000393405 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SNX11-202ENST00000393405 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
SNX11-202ENST00000393405 EHMT2Q96KQ7 1210 aa24.13■■□□□ 1.45
SNX11-202ENST00000393405 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
SNX11-202ENST00000393405 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
SNX11-202ENST00000393405 SCAF1Q9H7N4 1312 aaKnown RBP24.08■■□□□ 1.45
SNX11-202ENST00000393405 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
SNX11-202ENST00000393405 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
SNX11-202ENST00000393405 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
SNX11-202ENST00000393405 SMARCA2P51531 1590 aa23.89■■□□□ 1.41
SNX11-202ENST00000393405 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
SNX11-202ENST00000393405 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
SNX11-202ENST00000393405 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
SNX11-202ENST00000393405 SOGA1O94964 1423 aa23.62■■□□□ 1.37
SNX11-202ENST00000393405 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
SNX11-202ENST00000393405 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
SNX11-202ENST00000393405 MYT1Q01538 1121 aa23.51■■□□□ 1.35
SNX11-202ENST00000393405 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
SNX11-202ENST00000393405 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
SNX11-202ENST00000393405 EEA1Q15075 1411 aa23.45■■□□□ 1.34
SNX11-202ENST00000393405 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
SNX11-202ENST00000393405 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
SNX11-202ENST00000393405 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
SNX11-202ENST00000393405 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
SNX11-202ENST00000393405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
SNX11-202ENST00000393405 NEUROD1Q13562 356 aa23.37■■□□□ 1.33
SNX11-202ENST00000393405 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
SNX11-202ENST00000393405 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
SNX11-202ENST00000393405 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
SNX11-202ENST00000393405 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
SNX11-202ENST00000393405 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
SNX11-202ENST00000393405 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
SNX11-202ENST00000393405 GTF3C3Q9Y5Q9 886 aa23.24■■□□□ 1.31
SNX11-202ENST00000393405 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
SNX11-202ENST00000393405 KIF21BO75037 1637 aa23.17■■□□□ 1.3
SNX11-202ENST00000393405 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
SNX11-202ENST00000393405 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
SNX11-202ENST00000393405 CLIP1P30622 1438 aa23.05■■□□□ 1.28
SNX11-202ENST00000393405 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
SNX11-202ENST00000393405 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
SNX11-202ENST00000393405 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
SNX11-202ENST00000393405 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.27
SNX11-202ENST00000393405 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
SNX11-202ENST00000393405 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
SNX11-202ENST00000393405 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
SNX11-202ENST00000393405 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
SNX11-202ENST00000393405 CUX1P39880 1505 aa22.83■■□□□ 1.25
SNX11-202ENST00000393405 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
SNX11-202ENST00000393405 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
SNX11-202ENST00000393405 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
SNX11-202ENST00000393405 APLP2Q06481 763 aa22.79■■□□□ 1.24
SNX11-202ENST00000393405 CFTRP13569 1480 aa22.75■■□□□ 1.23
SNX11-202ENST00000393405 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
SNX11-202ENST00000393405 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
SNX11-202ENST00000393405 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.22
SNX11-202ENST00000393405 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
SNX11-202ENST00000393405 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
SNX11-202ENST00000393405 ARHGAP35Q9NRY4 1499 aa22.51■■□□□ 1.19
SNX11-202ENST00000393405 CUX2O14529 1486 aa22.5■■□□□ 1.19
SNX11-202ENST00000393405 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SNX11-202ENST00000393405 MIER1Q8N108 512 aa22.46■■□□□ 1.19
SNX11-202ENST00000393405 IGF1RP08069 1367 aa22.45■■□□□ 1.18
SNX11-202ENST00000393405 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
SNX11-202ENST00000393405 RRBP1Q9P2E9 1410 aaKnown RBP22.42■■□□□ 1.18
SNX11-202ENST00000393405 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
SNX11-202ENST00000393405 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
SNX11-202ENST00000393405 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
SNX11-202ENST00000393405 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
SNX11-202ENST00000393405 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
SNX11-202ENST00000393405 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
SNX11-202ENST00000393405 TIAM1Q13009 1591 aa22.26■■□□□ 1.15
SNX11-202ENST00000393405 ITGAEP38570 1179 aa22.24■■□□□ 1.15
SNX11-202ENST00000393405 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
SNX11-202ENST00000393405 MAP3K1Q13233 1512 aa22.2■■□□□ 1.15
SNX11-202ENST00000393405 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms