RNA–Protein interactions for RNA: ENST00000305354.4

TM4SF4-201, Transcript of transmembrane 4 L six family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF4, Length 2,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-201ENST00000305354 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
TM4SF4-201ENST00000305354 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
TM4SF4-201ENST00000305354 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
TM4SF4-201ENST00000305354 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
TM4SF4-201ENST00000305354 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
TM4SF4-201ENST00000305354 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
TM4SF4-201ENST00000305354 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
TM4SF4-201ENST00000305354 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
TM4SF4-201ENST00000305354 ABCC9O60706 1549 aa26.18■■□□□ 1.78
TM4SF4-201ENST00000305354 NACADO15069 1562 aa26.15■■□□□ 1.78
TM4SF4-201ENST00000305354 SCRIBQ14160 1630 aa26.14■■□□□ 1.77
TM4SF4-201ENST00000305354 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
TM4SF4-201ENST00000305354 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
TM4SF4-201ENST00000305354 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
TM4SF4-201ENST00000305354 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
TM4SF4-201ENST00000305354 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
TM4SF4-201ENST00000305354 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
TM4SF4-201ENST00000305354 WIZO95785 1651 aa25.26■■□□□ 1.63
TM4SF4-201ENST00000305354 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
TM4SF4-201ENST00000305354 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
TM4SF4-201ENST00000305354 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
TM4SF4-201ENST00000305354 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
TM4SF4-201ENST00000305354 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
TM4SF4-201ENST00000305354 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
TM4SF4-201ENST00000305354 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.58
TM4SF4-201ENST00000305354 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
TM4SF4-201ENST00000305354 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
TM4SF4-201ENST00000305354 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
TM4SF4-201ENST00000305354 PCGF6Q9BYE7 350 aa24.76■■□□□ 1.55
TM4SF4-201ENST00000305354 HRCP23327 699 aa24.74■■□□□ 1.55
TM4SF4-201ENST00000305354 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
TM4SF4-201ENST00000305354 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
TM4SF4-201ENST00000305354 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
TM4SF4-201ENST00000305354 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
TM4SF4-201ENST00000305354 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
TM4SF4-201ENST00000305354 BAZ1BQ9UIG0 1483 aaKnown RBP24.39■■□□□ 1.5
TM4SF4-201ENST00000305354 EEA1Q15075 1411 aa24.37■■□□□ 1.49
TM4SF4-201ENST00000305354 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
TM4SF4-201ENST00000305354 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
TM4SF4-201ENST00000305354 SOGA1O94964 1423 aa24.22■■□□□ 1.47
TM4SF4-201ENST00000305354 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
TM4SF4-201ENST00000305354 SYNJ1O43426 1573 aa24.14■■□□□ 1.46
TM4SF4-201ENST00000305354 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
TM4SF4-201ENST00000305354 NCAPD3P42695 1498 aa24.12■■□□□ 1.45
TM4SF4-201ENST00000305354 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
TM4SF4-201ENST00000305354 CEP162Q5TB80 1403 aa24.07■■□□□ 1.44
TM4SF4-201ENST00000305354 GOLGA3Q08378 1498 aa24.07■■□□□ 1.44
TM4SF4-201ENST00000305354 RUSC2Q8N2Y8 1516 aa24.07■■□□□ 1.44
TM4SF4-201ENST00000305354 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
TM4SF4-201ENST00000305354 KIF21BO75037 1637 aa24.01■■□□□ 1.43
TM4SF4-201ENST00000305354 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
TM4SF4-201ENST00000305354 PPARGC1BQ86YN6 1023 aaKnown RBP23.99■■□□□ 1.43
TM4SF4-201ENST00000305354 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
TM4SF4-201ENST00000305354 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
TM4SF4-201ENST00000305354 UBTFP17480 764 aaKnown RBP23.88■■□□□ 1.41
TM4SF4-201ENST00000305354 CFTRP13569 1480 aa23.82■■□□□ 1.4
TM4SF4-201ENST00000305354 PRDM2Q13029 1718 aa23.77■■□□□ 1.4
TM4SF4-201ENST00000305354 CUX1P39880 1505 aa23.72■■□□□ 1.39
TM4SF4-201ENST00000305354 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
TM4SF4-201ENST00000305354 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
TM4SF4-201ENST00000305354 CLIP1P30622 1438 aa23.7■■□□□ 1.38
TM4SF4-201ENST00000305354 PRXQ9BXM0 1461 aa23.63■■□□□ 1.37
TM4SF4-201ENST00000305354 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
TM4SF4-201ENST00000305354 KIF27Q86VH2 1401 aa23.58■■□□□ 1.37
TM4SF4-201ENST00000305354 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
TM4SF4-201ENST00000305354 CADPSQ9ULU8 1353 aa23.56■■□□□ 1.36
TM4SF4-201ENST00000305354 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
TM4SF4-201ENST00000305354 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
TM4SF4-201ENST00000305354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
TM4SF4-201ENST00000305354 APLP2Q06481 763 aa23.38■■□□□ 1.33
TM4SF4-201ENST00000305354 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
TM4SF4-201ENST00000305354 CUX2O14529 1486 aa23.34■■□□□ 1.33
TM4SF4-201ENST00000305354 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
TM4SF4-201ENST00000305354 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
TM4SF4-201ENST00000305354 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
TM4SF4-201ENST00000305354 IGF1RP08069 1367 aa23.27■■□□□ 1.32
TM4SF4-201ENST00000305354 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
TM4SF4-201ENST00000305354 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.31
TM4SF4-201ENST00000305354 LAMC3Q9Y6N6 1575 aa23.19■■□□□ 1.3
TM4SF4-201ENST00000305354 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
TM4SF4-201ENST00000305354 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
TM4SF4-201ENST00000305354 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
TM4SF4-201ENST00000305354 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
TM4SF4-201ENST00000305354 NESP48681 1621 aa23.1■■□□□ 1.29
TM4SF4-201ENST00000305354 HNRNPUL2Q1KMD3 747 aaKnown RBP23.09■■□□□ 1.29
TM4SF4-201ENST00000305354 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
TM4SF4-201ENST00000305354 CUL7Q14999 1698 aa23.06■■□□□ 1.28
TM4SF4-201ENST00000305354 RRBP1Q9P2E9 1410 aaKnown RBP23.04■■□□□ 1.28
TM4SF4-201ENST00000305354 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
TM4SF4-201ENST00000305354 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
TM4SF4-201ENST00000305354 KANK4Q5T7N3 995 aaPredicted RBP23.01■■□□□ 1.27
TM4SF4-201ENST00000305354 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
TM4SF4-201ENST00000305354 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
TM4SF4-201ENST00000305354 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
TM4SF4-201ENST00000305354 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
TM4SF4-201ENST00000305354 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
TM4SF4-201ENST00000305354 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
TM4SF4-201ENST00000305354 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
TM4SF4-201ENST00000305354 ABCA5Q8WWZ7 1642 aa22.91■■□□□ 1.26
TM4SF4-201ENST00000305354 CFAP43Q8NDM7 1665 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms