RNA–Protein interactions for RNA: ENST00000346736.6

C19orf57-201, Transcript of chromosome 19 open reading frame 57, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C19orf57, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf57-201ENST00000346736 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
C19orf57-201ENST00000346736 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
C19orf57-201ENST00000346736 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
C19orf57-201ENST00000346736 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
C19orf57-201ENST00000346736 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
C19orf57-201ENST00000346736 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
C19orf57-201ENST00000346736 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.93
C19orf57-201ENST00000346736 ABCC9O60706 1549 aa27.12■■□□□ 1.93
C19orf57-201ENST00000346736 NACADO15069 1562 aa26.88■■□□□ 1.89
C19orf57-201ENST00000346736 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
C19orf57-201ENST00000346736 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
C19orf57-201ENST00000346736 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
C19orf57-201ENST00000346736 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
C19orf57-201ENST00000346736 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
C19orf57-201ENST00000346736 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
C19orf57-201ENST00000346736 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
C19orf57-201ENST00000346736 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
C19orf57-201ENST00000346736 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
C19orf57-201ENST00000346736 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
C19orf57-201ENST00000346736 PABPN1Q86U42 306 aaKnown RBP eCLIP25.71■■□□□ 1.71
C19orf57-201ENST00000346736 WIZO95785 1651 aa25.67■■□□□ 1.7
C19orf57-201ENST00000346736 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
C19orf57-201ENST00000346736 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
C19orf57-201ENST00000346736 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
C19orf57-201ENST00000346736 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
C19orf57-201ENST00000346736 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
C19orf57-201ENST00000346736 TRIM41Q8WV44 630 aa25.14■■□□□ 1.61
C19orf57-201ENST00000346736 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
C19orf57-201ENST00000346736 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
C19orf57-201ENST00000346736 BAZ1BQ9UIG0 1483 aaKnown RBP24.99■■□□□ 1.59
C19orf57-201ENST00000346736 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.58
C19orf57-201ENST00000346736 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
C19orf57-201ENST00000346736 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
C19orf57-201ENST00000346736 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
C19orf57-201ENST00000346736 FAM9AQ8IZU1 332 aaPredicted RBP24.73■■□□□ 1.55
C19orf57-201ENST00000346736 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
C19orf57-201ENST00000346736 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
C19orf57-201ENST00000346736 CC2D2AQ9P2K1 1620 aa24.52■■□□□ 1.52
C19orf57-201ENST00000346736 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
C19orf57-201ENST00000346736 SOGA1O94964 1423 aa24.4■■□□□ 1.5
C19orf57-201ENST00000346736 CFTRP13569 1480 aa24.39■■□□□ 1.5
C19orf57-201ENST00000346736 EEA1Q15075 1411 aa24.36■■□□□ 1.49
C19orf57-201ENST00000346736 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
C19orf57-201ENST00000346736 CSRNP3Q8WYN3 585 aa24.29■■□□□ 1.48
C19orf57-201ENST00000346736 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
C19orf57-201ENST00000346736 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
C19orf57-201ENST00000346736 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
C19orf57-201ENST00000346736 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
C19orf57-201ENST00000346736 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
C19orf57-201ENST00000346736 CUX1P39880 1505 aa24.15■■□□□ 1.46
C19orf57-201ENST00000346736 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
C19orf57-201ENST00000346736 TNIKQ9UKE5 1360 aa24.08■■□□□ 1.45
C19orf57-201ENST00000346736 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
C19orf57-201ENST00000346736 UBTFP17480 764 aaKnown RBP24.02■■□□□ 1.44
C19orf57-201ENST00000346736 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
C19orf57-201ENST00000346736 KIF21BO75037 1637 aa24.01■■□□□ 1.43
C19orf57-201ENST00000346736 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
C19orf57-201ENST00000346736 CEP162Q5TB80 1403 aa23.97■■□□□ 1.43
C19orf57-201ENST00000346736 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
C19orf57-201ENST00000346736 NESP48681 1621 aa23.93■■□□□ 1.42
C19orf57-201ENST00000346736 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
C19orf57-201ENST00000346736 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
C19orf57-201ENST00000346736 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
C19orf57-201ENST00000346736 PPARGC1BQ86YN6 1023 aaKnown RBP23.84■■□□□ 1.41
C19orf57-201ENST00000346736 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
C19orf57-201ENST00000346736 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
C19orf57-201ENST00000346736 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
C19orf57-201ENST00000346736 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
C19orf57-201ENST00000346736 CUX2O14529 1486 aa23.75■■□□□ 1.39
C19orf57-201ENST00000346736 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
C19orf57-201ENST00000346736 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
C19orf57-201ENST00000346736 CLIP1P30622 1438 aa23.71■■□□□ 1.39
C19orf57-201ENST00000346736 IGF1RP08069 1367 aa23.69■■□□□ 1.38
C19orf57-201ENST00000346736 HRCP23327 699 aa23.69■■□□□ 1.38
C19orf57-201ENST00000346736 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
C19orf57-201ENST00000346736 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
C19orf57-201ENST00000346736 RANGAP1P46060 587 aaPredicted RBP23.64■■□□□ 1.37
C19orf57-201ENST00000346736 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
C19orf57-201ENST00000346736 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
C19orf57-201ENST00000346736 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
C19orf57-201ENST00000346736 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
C19orf57-201ENST00000346736 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
C19orf57-201ENST00000346736 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
C19orf57-201ENST00000346736 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
C19orf57-201ENST00000346736 ARAP1Q96P48 1450 aa23.41■■□□□ 1.34
C19orf57-201ENST00000346736 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.34
C19orf57-201ENST00000346736 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
C19orf57-201ENST00000346736 CUL7Q14999 1698 aa23.37■■□□□ 1.33
C19orf57-201ENST00000346736 APLP2Q06481 763 aa23.37■■□□□ 1.33
C19orf57-201ENST00000346736 ABCA5Q8WWZ7 1642 aa23.36■■□□□ 1.33
C19orf57-201ENST00000346736 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
C19orf57-201ENST00000346736 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
C19orf57-201ENST00000346736 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
C19orf57-201ENST00000346736 WDR62O43379 1518 aa23.24■■□□□ 1.31
C19orf57-201ENST00000346736 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
C19orf57-201ENST00000346736 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
C19orf57-201ENST00000346736 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
C19orf57-201ENST00000346736 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
C19orf57-201ENST00000346736 AQRO60306 1485 aaKnown RBP eCLIP23.16■■□□□ 1.3
C19orf57-201ENST00000346736 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms