RNA–Protein interactions for RNA: ENST00000311936.7

KRAS-202, Transcript of KRAS proto-oncogene, GTPase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KRAS, Length 5,765 nt, Biotype protein coding, Subcellular localisation Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRAS-202ENST00000311936 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
KRAS-202ENST00000311936 NISCHQ9Y2I1 1504 aa26.43■■□□□ 1.82
KRAS-202ENST00000311936 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
KRAS-202ENST00000311936 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
KRAS-202ENST00000311936 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
KRAS-202ENST00000311936 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
KRAS-202ENST00000311936 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
KRAS-202ENST00000311936 APLP2Q06481 763 aa24.14■■□□□ 1.46
KRAS-202ENST00000311936 RANGAP1P46060 587 aaPredicted RBP24.14■■□□□ 1.45
KRAS-202ENST00000311936 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
KRAS-202ENST00000311936 TRIM41Q8WV44 630 aa23.91■■□□□ 1.42
KRAS-202ENST00000311936 ATP1B4Q9UN42 357 aaPredicted RBP23.74■■□□□ 1.39
KRAS-202ENST00000311936 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
KRAS-202ENST00000311936 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
KRAS-202ENST00000311936 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
KRAS-202ENST00000311936 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.29
KRAS-202ENST00000311936 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
KRAS-202ENST00000311936 ABCC9O60706 1549 aa23.1■■□□□ 1.29
KRAS-202ENST00000311936 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
KRAS-202ENST00000311936 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
KRAS-202ENST00000311936 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
KRAS-202ENST00000311936 ITGAEP38570 1179 aa22.96■■□□□ 1.27
KRAS-202ENST00000311936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
KRAS-202ENST00000311936 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
KRAS-202ENST00000311936 YTHDC1Q96MU7 727 aaKnown RBP22.82■■□□□ 1.24
KRAS-202ENST00000311936 TRIM26Q12899 539 aaPredicted RBP22.77■■□□□ 1.24
KRAS-202ENST00000311936 CENPBP07199 599 aaPredicted RBP22.75■■□□□ 1.23
KRAS-202ENST00000311936 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
KRAS-202ENST00000311936 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
KRAS-202ENST00000311936 CNGB1Q14028 1251 aaPredicted RBP22.5■■□□□ 1.19
KRAS-202ENST00000311936 HRCP23327 699 aa22.41■■□□□ 1.18
KRAS-202ENST00000311936 NEFLP07196 543 aa22.34■■□□□ 1.17
KRAS-202ENST00000311936 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.17
KRAS-202ENST00000311936 FAM50AQ14320 339 aaKnown RBP22.3■■□□□ 1.16
KRAS-202ENST00000311936 FBLN2P98095 1184 aa22.27■■□□□ 1.16
KRAS-202ENST00000311936 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
KRAS-202ENST00000311936 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
KRAS-202ENST00000311936 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
KRAS-202ENST00000311936 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
KRAS-202ENST00000311936 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
KRAS-202ENST00000311936 SCRIBQ14160 1630 aa22.03■■□□□ 1.12
KRAS-202ENST00000311936 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
KRAS-202ENST00000311936 ZNF326Q5BKZ1 582 aaKnown RBP21.9■■□□□ 1.1
KRAS-202ENST00000311936 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
KRAS-202ENST00000311936 ZCCHC6Q5VYS8 1495 aaKnown RBP21.82■■□□□ 1.08
KRAS-202ENST00000311936 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
KRAS-202ENST00000311936 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
KRAS-202ENST00000311936 BCANQ96GW7 911 aa21.51■■□□□ 1.03
KRAS-202ENST00000311936 ANP32CO43423 234 aa21.46■■□□□ 1.03
KRAS-202ENST00000311936 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
KRAS-202ENST00000311936 ZNF316A6NFI3 1004 aaPredicted RBP21.43■■□□□ 1.02
KRAS-202ENST00000311936 CLSPNQ9HAW4 1339 aa21.43■■□□□ 1.02
KRAS-202ENST00000311936 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
KRAS-202ENST00000311936 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
KRAS-202ENST00000311936 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
KRAS-202ENST00000311936 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
KRAS-202ENST00000311936 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
KRAS-202ENST00000311936 BCL11AQ9H165 835 aa21.31■■□□□ 1
KRAS-202ENST00000311936 SLC24A1O60721 1099 aa21.29■■□□□ 1
KRAS-202ENST00000311936 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
KRAS-202ENST00000311936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.99
KRAS-202ENST00000311936 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
KRAS-202ENST00000311936 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
KRAS-202ENST00000311936 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
KRAS-202ENST00000311936 ESF1Q9H501 851 aaKnown RBP21.19■□□□□ 0.98
KRAS-202ENST00000311936 TONSLQ96HA7 1378 aa21.15■□□□□ 0.98
KRAS-202ENST00000311936 STAG3Q9UJ98 1225 aa21.15■□□□□ 0.98
KRAS-202ENST00000311936 MYT1Q01538 1121 aa21.13■□□□□ 0.97
KRAS-202ENST00000311936 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
KRAS-202ENST00000311936 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
KRAS-202ENST00000311936 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
KRAS-202ENST00000311936 MTUS2Q5JR59 1369 aa21.09■□□□□ 0.97
KRAS-202ENST00000311936 CANXP27824 592 aaKnown RBP21.08■□□□□ 0.97
KRAS-202ENST00000311936 KCNH8Q96L42 1107 aa21.08■□□□□ 0.97
KRAS-202ENST00000311936 CLIP1P30622 1438 aa21.08■□□□□ 0.97
KRAS-202ENST00000311936 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.97
KRAS-202ENST00000311936 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.97
KRAS-202ENST00000311936 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
KRAS-202ENST00000311936 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
KRAS-202ENST00000311936 SALL2Q9Y467 1007 aaPredicted RBP21.04■□□□□ 0.96
KRAS-202ENST00000311936 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
KRAS-202ENST00000311936 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
KRAS-202ENST00000311936 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
KRAS-202ENST00000311936 NACADO15069 1562 aa21.01■□□□□ 0.95
KRAS-202ENST00000311936 NEFMP07197 916 aa21.01■□□□□ 0.95
KRAS-202ENST00000311936 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
KRAS-202ENST00000311936 FAM9BQ8IZU0 186 aa20.99■□□□□ 0.95
KRAS-202ENST00000311936 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
KRAS-202ENST00000311936 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
KRAS-202ENST00000311936 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
KRAS-202ENST00000311936 ACIN1Q9UKV3 1341 aaKnown RBP20.94■□□□□ 0.94
KRAS-202ENST00000311936 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
KRAS-202ENST00000311936 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
KRAS-202ENST00000311936 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
KRAS-202ENST00000311936 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
KRAS-202ENST00000311936 FKBP8Q14318 412 aa20.83■□□□□ 0.92
KRAS-202ENST00000311936 RGL3Q3MIN7 710 aa20.82■□□□□ 0.92
KRAS-202ENST00000311936 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
KRAS-202ENST00000311936 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
KRAS-202ENST00000311936 TMC1Q8TDI8 760 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms