RNA–Protein interactions for RNA: ENST00000544439.5

SRPX-206, Transcript of sushi repeat containing protein X-linked, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SRPX, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPX-206ENST00000544439 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
SRPX-206ENST00000544439 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
SRPX-206ENST00000544439 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
SRPX-206ENST00000544439 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
SRPX-206ENST00000544439 DCAF8L2P0C7V8 631 aa27.94■■■□□ 2.06
SRPX-206ENST00000544439 ABCC9O60706 1549 aa27.84■■■□□ 2.05
SRPX-206ENST00000544439 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
SRPX-206ENST00000544439 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
SRPX-206ENST00000544439 NACADO15069 1562 aa27.54■■■□□ 2
SRPX-206ENST00000544439 RB1CC1Q8TDY2 1594 aa27.31■■□□□ 1.96
SRPX-206ENST00000544439 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
SRPX-206ENST00000544439 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
SRPX-206ENST00000544439 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
SRPX-206ENST00000544439 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.81
SRPX-206ENST00000544439 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
SRPX-206ENST00000544439 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
SRPX-206ENST00000544439 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
SRPX-206ENST00000544439 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
SRPX-206ENST00000544439 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
SRPX-206ENST00000544439 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
SRPX-206ENST00000544439 WIZO95785 1651 aa25.96■■□□□ 1.75
SRPX-206ENST00000544439 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
SRPX-206ENST00000544439 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
SRPX-206ENST00000544439 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
SRPX-206ENST00000544439 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
SRPX-206ENST00000544439 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
SRPX-206ENST00000544439 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
SRPX-206ENST00000544439 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
SRPX-206ENST00000544439 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
SRPX-206ENST00000544439 HMGXB3Q12766 1538 aa25.39■■□□□ 1.66
SRPX-206ENST00000544439 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
SRPX-206ENST00000544439 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
SRPX-206ENST00000544439 TRIM41Q8WV44 630 aa25.07■■□□□ 1.6
SRPX-206ENST00000544439 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
SRPX-206ENST00000544439 CFTRP13569 1480 aa24.83■■□□□ 1.57
SRPX-206ENST00000544439 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
SRPX-206ENST00000544439 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
SRPX-206ENST00000544439 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
SRPX-206ENST00000544439 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
SRPX-206ENST00000544439 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
SRPX-206ENST00000544439 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
SRPX-206ENST00000544439 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
SRPX-206ENST00000544439 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
SRPX-206ENST00000544439 EEA1Q15075 1411 aa24.51■■□□□ 1.51
SRPX-206ENST00000544439 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
SRPX-206ENST00000544439 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
SRPX-206ENST00000544439 CUX1P39880 1505 aa24.46■■□□□ 1.51
SRPX-206ENST00000544439 NESP48681 1621 aa24.44■■□□□ 1.5
SRPX-206ENST00000544439 SOGA1O94964 1423 aa24.42■■□□□ 1.5
SRPX-206ENST00000544439 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
SRPX-206ENST00000544439 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SRPX-206ENST00000544439 CEP164Q9UPV0 1460 aa24.34■■□□□ 1.49
SRPX-206ENST00000544439 RUSC2Q8N2Y8 1516 aa24.29■■□□□ 1.48
SRPX-206ENST00000544439 CSRNP3Q8WYN3 585 aa24.28■■□□□ 1.48
SRPX-206ENST00000544439 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
SRPX-206ENST00000544439 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
SRPX-206ENST00000544439 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
SRPX-206ENST00000544439 TOPBP1Q92547 1522 aa24.19■■□□□ 1.46
SRPX-206ENST00000544439 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
SRPX-206ENST00000544439 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
SRPX-206ENST00000544439 KIF21BO75037 1637 aa24.16■■□□□ 1.46
SRPX-206ENST00000544439 GOLGA3Q08378 1498 aa24.14■■□□□ 1.46
SRPX-206ENST00000544439 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
SRPX-206ENST00000544439 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
SRPX-206ENST00000544439 CUX2O14529 1486 aa24.07■■□□□ 1.44
SRPX-206ENST00000544439 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
SRPX-206ENST00000544439 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
SRPX-206ENST00000544439 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
SRPX-206ENST00000544439 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
SRPX-206ENST00000544439 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
SRPX-206ENST00000544439 PRXQ9BXM0 1461 aa23.97■■□□□ 1.43
SRPX-206ENST00000544439 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
SRPX-206ENST00000544439 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
SRPX-206ENST00000544439 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
SRPX-206ENST00000544439 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
SRPX-206ENST00000544439 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
SRPX-206ENST00000544439 WDR62O43379 1518 aa23.9■■□□□ 1.42
SRPX-206ENST00000544439 IGF1RP08069 1367 aa23.87■■□□□ 1.41
SRPX-206ENST00000544439 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
SRPX-206ENST00000544439 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
SRPX-206ENST00000544439 CUL7Q14999 1698 aa23.8■■□□□ 1.4
SRPX-206ENST00000544439 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
SRPX-206ENST00000544439 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
SRPX-206ENST00000544439 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
SRPX-206ENST00000544439 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
SRPX-206ENST00000544439 CLIP1P30622 1438 aa23.73■■□□□ 1.39
SRPX-206ENST00000544439 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
SRPX-206ENST00000544439 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
SRPX-206ENST00000544439 GRIN2BQ13224 1484 aa23.58■■□□□ 1.36
SRPX-206ENST00000544439 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.36
SRPX-206ENST00000544439 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
SRPX-206ENST00000544439 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
SRPX-206ENST00000544439 VPS8Q8N3P4 1428 aa23.54■■□□□ 1.36
SRPX-206ENST00000544439 ZNF608Q9ULD9 1512 aaPredicted RBP23.53■■□□□ 1.36
SRPX-206ENST00000544439 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
SRPX-206ENST00000544439 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
SRPX-206ENST00000544439 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
SRPX-206ENST00000544439 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
SRPX-206ENST00000544439 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
SRPX-206ENST00000544439 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms