RNA–Protein interactions for RNA: ENST00000395156.7

STX1A-204, Transcript of syntaxin 1A, humanhuman

TSL 1 (best) BASIC

Gene STX1A, Length 2,050 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-204ENST00000395156 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
STX1A-204ENST00000395156 CCDC180Q9P1Z9 1646 aa30.41■■■□□ 2.46
STX1A-204ENST00000395156 ABCC9O60706 1549 aa29.11■■■□□ 2.25
STX1A-204ENST00000395156 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
STX1A-204ENST00000395156 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
STX1A-204ENST00000395156 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.17
STX1A-204ENST00000395156 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
STX1A-204ENST00000395156 NACADO15069 1562 aa28.37■■■□□ 2.13
STX1A-204ENST00000395156 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
STX1A-204ENST00000395156 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
STX1A-204ENST00000395156 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
STX1A-204ENST00000395156 UNC13AQ9UPW8 1703 aa27.79■■■□□ 2.04
STX1A-204ENST00000395156 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.98
STX1A-204ENST00000395156 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
STX1A-204ENST00000395156 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
STX1A-204ENST00000395156 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
STX1A-204ENST00000395156 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
STX1A-204ENST00000395156 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
STX1A-204ENST00000395156 BAZ1AQ9NRL2 1556 aaPredicted RBP26.81■■□□□ 1.88
STX1A-204ENST00000395156 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
STX1A-204ENST00000395156 WIZO95785 1651 aa26.66■■□□□ 1.86
STX1A-204ENST00000395156 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
STX1A-204ENST00000395156 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
STX1A-204ENST00000395156 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
STX1A-204ENST00000395156 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
STX1A-204ENST00000395156 CC2D2AQ9P2K1 1620 aa26.33■■□□□ 1.81
STX1A-204ENST00000395156 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
STX1A-204ENST00000395156 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
STX1A-204ENST00000395156 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
STX1A-204ENST00000395156 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
STX1A-204ENST00000395156 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
STX1A-204ENST00000395156 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
STX1A-204ENST00000395156 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
STX1A-204ENST00000395156 CFTRP13569 1480 aa25.53■■□□□ 1.68
STX1A-204ENST00000395156 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
STX1A-204ENST00000395156 NESP48681 1621 aa25.48■■□□□ 1.67
STX1A-204ENST00000395156 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
STX1A-204ENST00000395156 ABCC8Q09428 1581 aa25.45■■□□□ 1.66
STX1A-204ENST00000395156 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
STX1A-204ENST00000395156 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
STX1A-204ENST00000395156 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
STX1A-204ENST00000395156 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
STX1A-204ENST00000395156 SYNJ1O43426 1573 aa25.2■■□□□ 1.63
STX1A-204ENST00000395156 KIF21AQ7Z4S6 1674 aa25.2■■□□□ 1.62
STX1A-204ENST00000395156 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
STX1A-204ENST00000395156 CUX1P39880 1505 aa25.12■■□□□ 1.61
STX1A-204ENST00000395156 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
STX1A-204ENST00000395156 TOP2BQ02880 1626 aa25.08■■□□□ 1.61
STX1A-204ENST00000395156 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
STX1A-204ENST00000395156 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
STX1A-204ENST00000395156 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
STX1A-204ENST00000395156 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
STX1A-204ENST00000395156 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
STX1A-204ENST00000395156 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
STX1A-204ENST00000395156 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
STX1A-204ENST00000395156 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
STX1A-204ENST00000395156 SOGA1O94964 1423 aa24.87■■□□□ 1.57
STX1A-204ENST00000395156 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
STX1A-204ENST00000395156 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
STX1A-204ENST00000395156 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
STX1A-204ENST00000395156 WDR62O43379 1518 aa24.77■■□□□ 1.56
STX1A-204ENST00000395156 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
STX1A-204ENST00000395156 LOC105371045A0A1W2PR82 267 aa24.65■■□□□ 1.54
STX1A-204ENST00000395156 CUX2O14529 1486 aa24.65■■□□□ 1.54
STX1A-204ENST00000395156 WDR97A6NE52 1622 aa24.64■■□□□ 1.53
STX1A-204ENST00000395156 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
STX1A-204ENST00000395156 EEA1Q15075 1411 aa24.62■■□□□ 1.53
STX1A-204ENST00000395156 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
STX1A-204ENST00000395156 EHMT2Q96KQ7 1210 aa24.62■■□□□ 1.53
STX1A-204ENST00000395156 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
STX1A-204ENST00000395156 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
STX1A-204ENST00000395156 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
STX1A-204ENST00000395156 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
STX1A-204ENST00000395156 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
STX1A-204ENST00000395156 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
STX1A-204ENST00000395156 IGF1RP08069 1367 aa24.45■■□□□ 1.5
STX1A-204ENST00000395156 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.52e-6■■■■■ 26.9
STX1A-204ENST00000395156 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
STX1A-204ENST00000395156 KIF21BO75037 1637 aa24.4■■□□□ 1.5
STX1A-204ENST00000395156 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
STX1A-204ENST00000395156 PRXQ9BXM0 1461 aa24.37■■□□□ 1.49
STX1A-204ENST00000395156 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
STX1A-204ENST00000395156 RAPGEF2Q9Y4G8 1499 aa24.36■■□□□ 1.49
STX1A-204ENST00000395156 GOLGA3Q08378 1498 aa24.33■■□□□ 1.49
STX1A-204ENST00000395156 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
STX1A-204ENST00000395156 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
STX1A-204ENST00000395156 CUL7Q14999 1698 aa24.28■■□□□ 1.48
STX1A-204ENST00000395156 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
STX1A-204ENST00000395156 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
STX1A-204ENST00000395156 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
STX1A-204ENST00000395156 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
STX1A-204ENST00000395156 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
STX1A-204ENST00000395156 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
STX1A-204ENST00000395156 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
STX1A-204ENST00000395156 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
STX1A-204ENST00000395156 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
STX1A-204ENST00000395156 CTTNBP2Q8WZ74 1663 aa24.03■■□□□ 1.44
STX1A-204ENST00000395156 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
STX1A-204ENST00000395156 FBLN2P98095 1184 aa24.01■■□□□ 1.43
STX1A-204ENST00000395156 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms