RNA–Protein interactions for RNA: ENST00000617139.4

NID2-208, Transcript of nidogen 2, humanhuman

TSL 5 BASIC

Gene NID2, Length 3,827 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-208ENST00000617139 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
NID2-208ENST00000617139 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
NID2-208ENST00000617139 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
NID2-208ENST00000617139 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
NID2-208ENST00000617139 EHMT2Q96KQ7 1210 aa26.07■■□□□ 1.76
NID2-208ENST00000617139 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
NID2-208ENST00000617139 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
NID2-208ENST00000617139 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
NID2-208ENST00000617139 HRCP23327 699 aa25.24■■□□□ 1.63
NID2-208ENST00000617139 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
NID2-208ENST00000617139 TTBK1Q5TCY1 1321 aaPredicted RBP25.19■■□□□ 1.62
NID2-208ENST00000617139 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
NID2-208ENST00000617139 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
NID2-208ENST00000617139 TRIM26Q12899 539 aaPredicted RBP24.54■■□□□ 1.52
NID2-208ENST00000617139 CCER1Q8TC90 406 aaPredicted RBP24.48■■□□□ 1.51
NID2-208ENST00000617139 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.49
NID2-208ENST00000617139 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
NID2-208ENST00000617139 MYO15BQ96JP2 1530 aa24.29■■□□□ 1.48
NID2-208ENST00000617139 ZEB1P37275 1124 aaPredicted RBP24.25■■□□□ 1.47
NID2-208ENST00000617139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.23■■□□□ 1.47
NID2-208ENST00000617139 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
NID2-208ENST00000617139 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
NID2-208ENST00000617139 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
NID2-208ENST00000617139 APLP2Q06481 763 aa23.83■■□□□ 1.41
NID2-208ENST00000617139 HNRNPUL2Q1KMD3 747 aaKnown RBP23.77■■□□□ 1.4
NID2-208ENST00000617139 DIEXFQ68CQ4 756 aaKnown RBP23.75■■□□□ 1.39
NID2-208ENST00000617139 GTF3C3Q9Y5Q9 886 aa23.75■■□□□ 1.39
NID2-208ENST00000617139 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
NID2-208ENST00000617139 NEUROD1Q13562 356 aa23.52■■□□□ 1.36
NID2-208ENST00000617139 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
NID2-208ENST00000617139 ITGAEP38570 1179 aa23.49■■□□□ 1.35
NID2-208ENST00000617139 ACIN1Q9UKV3 1341 aaKnown RBP23.46■■□□□ 1.35
NID2-208ENST00000617139 DCAF1Q9Y4B6 1507 aa23.45■■□□□ 1.34
NID2-208ENST00000617139 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
NID2-208ENST00000617139 BCANQ96GW7 911 aa23.16■■□□□ 1.3
NID2-208ENST00000617139 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
NID2-208ENST00000617139 ABCC9O60706 1549 aa23.1■■□□□ 1.29
NID2-208ENST00000617139 PABPN1Q86U42 306 aaKnown RBP eCLIP23.05■■□□□ 1.28
NID2-208ENST00000617139 CCDC180Q9P1Z9 1646 aa23.03■■□□□ 1.28
NID2-208ENST00000617139 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
NID2-208ENST00000617139 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
NID2-208ENST00000617139 MIER1Q8N108 512 aa22.98■■□□□ 1.27
NID2-208ENST00000617139 NEFLP07196 543 aa22.86■■□□□ 1.25
NID2-208ENST00000617139 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
NID2-208ENST00000617139 MYT1Q01538 1121 aa22.85■■□□□ 1.25
NID2-208ENST00000617139 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
NID2-208ENST00000617139 ERICH6Q7L0X2 663 aa22.82■■□□□ 1.24
NID2-208ENST00000617139 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
NID2-208ENST00000617139 HIRIP3Q9BW71 556 aaPredicted RBP22.62■■□□□ 1.21
NID2-208ENST00000617139 POLR3GLQ9BT43 218 aa22.62■■□□□ 1.21
NID2-208ENST00000617139 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
NID2-208ENST00000617139 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
NID2-208ENST00000617139 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.19
NID2-208ENST00000617139 DDX10Q13206 875 aaKnown RBP22.48■■□□□ 1.19
NID2-208ENST00000617139 FKBP8Q14318 412 aa22.48■■□□□ 1.19
NID2-208ENST00000617139 CEP162Q5TB80 1403 aa22.46■■□□□ 1.19
NID2-208ENST00000617139 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
NID2-208ENST00000617139 SOGA1O94964 1423 aa22.35■■□□□ 1.17
NID2-208ENST00000617139 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
NID2-208ENST00000617139 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
NID2-208ENST00000617139 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
NID2-208ENST00000617139 ANP32CO43423 234 aa22.23■■□□□ 1.15
NID2-208ENST00000617139 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
NID2-208ENST00000617139 CLIP1P30622 1438 aa22.2■■□□□ 1.14
NID2-208ENST00000617139 SUPT16HQ9Y5B9 1047 aaKnown RBP22.2■■□□□ 1.14
NID2-208ENST00000617139 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
NID2-208ENST00000617139 MROH2BQ7Z745 1585 aa22.17■■□□□ 1.14
NID2-208ENST00000617139 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
NID2-208ENST00000617139 ZNF326Q5BKZ1 582 aaKnown RBP22.11■■□□□ 1.13
NID2-208ENST00000617139 SIN3AQ96ST3 1273 aa22.11■■□□□ 1.13
NID2-208ENST00000617139 HNRNPUQ00839 825 aaKnown RBP eCLIP22.09■■□□□ 1.13
NID2-208ENST00000617139 TNIKQ9UKE5 1360 aa22.08■■□□□ 1.13
NID2-208ENST00000617139 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
NID2-208ENST00000617139 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
NID2-208ENST00000617139 CDK11AQ9UQ88 783 aaPredicted RBP22.01■■□□□ 1.11
NID2-208ENST00000617139 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
NID2-208ENST00000617139 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
NID2-208ENST00000617139 WIZO95785 1651 aa21.96■■□□□ 1.11
NID2-208ENST00000617139 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
NID2-208ENST00000617139 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
NID2-208ENST00000617139 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
NID2-208ENST00000617139 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.09
NID2-208ENST00000617139 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
NID2-208ENST00000617139 NBR1Q14596 966 aa21.87■■□□□ 1.09
NID2-208ENST00000617139 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.08
NID2-208ENST00000617139 TONSLQ96HA7 1378 aa21.82■■□□□ 1.08
NID2-208ENST00000617139 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
NID2-208ENST00000617139 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
NID2-208ENST00000617139 NACADO15069 1562 aa21.72■■□□□ 1.07
NID2-208ENST00000617139 RBM19Q9Y4C8 960 aaKnown RBP21.7■■□□□ 1.06
NID2-208ENST00000617139 CEP164Q9UPV0 1460 aa21.7■■□□□ 1.06
NID2-208ENST00000617139 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
NID2-208ENST00000617139 EEA1Q15075 1411 aa21.69■■□□□ 1.06
NID2-208ENST00000617139 MRS2Q9HD23 443 aa21.67■■□□□ 1.06
NID2-208ENST00000617139 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
NID2-208ENST00000617139 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
NID2-208ENST00000617139 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
NID2-208ENST00000617139 B4GALNT3Q6L9W6 998 aa21.62■■□□□ 1.05
NID2-208ENST00000617139 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
NID2-208ENST00000617139 DAXXQ9UER7 740 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms