RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
LINC01840-201ENST00000421870 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.79
LINC01840-201ENST00000421870 ABCC9O60706 1549 aa31.98■■■□□ 2.71
LINC01840-201ENST00000421870 RB1CC1Q8TDY2 1594 aa30.7■■■□□ 2.5
LINC01840-201ENST00000421870 NACADO15069 1562 aa30.63■■■□□ 2.49
LINC01840-201ENST00000421870 DCAF8L2P0C7V8 631 aa30.53■■■□□ 2.48
LINC01840-201ENST00000421870 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
LINC01840-201ENST00000421870 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
LINC01840-201ENST00000421870 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
LINC01840-201ENST00000421870 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
LINC01840-201ENST00000421870 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
LINC01840-201ENST00000421870 BICRAQ9NZM4 1560 aa29.81■■■□□ 2.36
LINC01840-201ENST00000421870 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
LINC01840-201ENST00000421870 SCRIBQ14160 1630 aa29.58■■■□□ 2.33
LINC01840-201ENST00000421870 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
LINC01840-201ENST00000421870 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.24
LINC01840-201ENST00000421870 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
LINC01840-201ENST00000421870 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
LINC01840-201ENST00000421870 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
LINC01840-201ENST00000421870 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
LINC01840-201ENST00000421870 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
LINC01840-201ENST00000421870 ATAD2BQ9ULI0 1458 aa28.24■■■□□ 2.11
LINC01840-201ENST00000421870 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
LINC01840-201ENST00000421870 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
LINC01840-201ENST00000421870 PEG3Q9GZU2 1588 aa28.08■■■□□ 2.09
LINC01840-201ENST00000421870 HMGXB3Q12766 1538 aa28.08■■■□□ 2.08
LINC01840-201ENST00000421870 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
LINC01840-201ENST00000421870 WIZO95785 1651 aa27.78■■■□□ 2.04
LINC01840-201ENST00000421870 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
LINC01840-201ENST00000421870 NESP48681 1621 aa27.63■■■□□ 2.01
LINC01840-201ENST00000421870 ERCC6Q03468 1493 aa27.56■■■□□ 2
LINC01840-201ENST00000421870 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
LINC01840-201ENST00000421870 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
LINC01840-201ENST00000421870 TOP2AP11388 1531 aaKnown RBP27.43■■□□□ 1.98
LINC01840-201ENST00000421870 CUX2O14529 1486 aa27.39■■□□□ 1.98
LINC01840-201ENST00000421870 PDS5BQ9NTI5 1447 aa27.37■■□□□ 1.97
LINC01840-201ENST00000421870 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
LINC01840-201ENST00000421870 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
LINC01840-201ENST00000421870 CFTRP13569 1480 aa27.23■■□□□ 1.95
LINC01840-201ENST00000421870 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
LINC01840-201ENST00000421870 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
LINC01840-201ENST00000421870 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
LINC01840-201ENST00000421870 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
LINC01840-201ENST00000421870 WDR62O43379 1518 aa27■■□□□ 1.91
LINC01840-201ENST00000421870 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
LINC01840-201ENST00000421870 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
LINC01840-201ENST00000421870 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
LINC01840-201ENST00000421870 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
LINC01840-201ENST00000421870 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
LINC01840-201ENST00000421870 TOPBP1Q92547 1522 aa26.63■■□□□ 1.85
LINC01840-201ENST00000421870 DNMBPQ6XZF7 1577 aa26.57■■□□□ 1.84
LINC01840-201ENST00000421870 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
LINC01840-201ENST00000421870 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
LINC01840-201ENST00000421870 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
LINC01840-201ENST00000421870 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
LINC01840-201ENST00000421870 CUX1P39880 1505 aa26.35■■□□□ 1.81
LINC01840-201ENST00000421870 SOGA1O94964 1423 aa26.31■■□□□ 1.8
LINC01840-201ENST00000421870 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
LINC01840-201ENST00000421870 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
LINC01840-201ENST00000421870 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
LINC01840-201ENST00000421870 EIF4G3O43432 1585 aaKnown RBP26.28■■□□□ 1.8
LINC01840-201ENST00000421870 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
LINC01840-201ENST00000421870 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
LINC01840-201ENST00000421870 WDR97A6NE52 1622 aa26.16■■□□□ 1.78
LINC01840-201ENST00000421870 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
LINC01840-201ENST00000421870 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
LINC01840-201ENST00000421870 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
LINC01840-201ENST00000421870 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
LINC01840-201ENST00000421870 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
LINC01840-201ENST00000421870 CHD1O14646 1710 aa26.01■■□□□ 1.75
LINC01840-201ENST00000421870 GRIN2BQ13224 1484 aa26■■□□□ 1.75
LINC01840-201ENST00000421870 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
LINC01840-201ENST00000421870 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
LINC01840-201ENST00000421870 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
LINC01840-201ENST00000421870 FBLN2P98095 1184 aa25.95■■□□□ 1.74
LINC01840-201ENST00000421870 ABCA5Q8WWZ7 1642 aa25.94■■□□□ 1.74
LINC01840-201ENST00000421870 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
LINC01840-201ENST00000421870 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.74
LINC01840-201ENST00000421870 SYNJ2O15056 1496 aa25.86■■□□□ 1.73
LINC01840-201ENST00000421870 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
LINC01840-201ENST00000421870 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
LINC01840-201ENST00000421870 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
LINC01840-201ENST00000421870 TRIM41Q8WV44 630 aa25.81■■□□□ 1.72
LINC01840-201ENST00000421870 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
LINC01840-201ENST00000421870 CLASP1Q7Z460 1538 aa25.73■■□□□ 1.71
LINC01840-201ENST00000421870 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
LINC01840-201ENST00000421870 ADAMTS12P58397 1594 aa25.68■■□□□ 1.7
LINC01840-201ENST00000421870 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
LINC01840-201ENST00000421870 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
LINC01840-201ENST00000421870 CYB5RLQ6IPT4 315 aa25.6■■□□□ 1.69
LINC01840-201ENST00000421870 NUP160Q12769 1436 aa25.58■■□□□ 1.69
LINC01840-201ENST00000421870 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
LINC01840-201ENST00000421870 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
LINC01840-201ENST00000421870 IGF1RP08069 1367 aa25.55■■□□□ 1.68
LINC01840-201ENST00000421870 CEP170Q5SW79 1584 aa25.54■■□□□ 1.68
LINC01840-201ENST00000421870 CUL7Q14999 1698 aa25.43■■□□□ 1.66
LINC01840-201ENST00000421870 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
LINC01840-201ENST00000421870 CARMIL1Q5VZK9 1371 aa25.36■■□□□ 1.65
LINC01840-201ENST00000421870 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
LINC01840-201ENST00000421870 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms