RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
GTF2IRD1-203ENST00000455841 DCAF8L2P0C7V8 631 aa28.15■■■□□ 2.1
GTF2IRD1-203ENST00000455841 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
GTF2IRD1-203ENST00000455841 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
GTF2IRD1-203ENST00000455841 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
GTF2IRD1-203ENST00000455841 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
GTF2IRD1-203ENST00000455841 ABCC9O60706 1549 aa26.65■■□□□ 1.86
GTF2IRD1-203ENST00000455841 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
GTF2IRD1-203ENST00000455841 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
GTF2IRD1-203ENST00000455841 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
GTF2IRD1-203ENST00000455841 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
GTF2IRD1-203ENST00000455841 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
GTF2IRD1-203ENST00000455841 NACADO15069 1562 aa25.53■■□□□ 1.68
GTF2IRD1-203ENST00000455841 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
GTF2IRD1-203ENST00000455841 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
GTF2IRD1-203ENST00000455841 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
GTF2IRD1-203ENST00000455841 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
GTF2IRD1-203ENST00000455841 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
GTF2IRD1-203ENST00000455841 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
GTF2IRD1-203ENST00000455841 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
GTF2IRD1-203ENST00000455841 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
GTF2IRD1-203ENST00000455841 WIZO95785 1651 aa24.99■■□□□ 1.59
GTF2IRD1-203ENST00000455841 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
GTF2IRD1-203ENST00000455841 PCGF6Q9BYE7 350 aa24.78■■□□□ 1.56
GTF2IRD1-203ENST00000455841 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
GTF2IRD1-203ENST00000455841 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
GTF2IRD1-203ENST00000455841 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
GTF2IRD1-203ENST00000455841 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.53
GTF2IRD1-203ENST00000455841 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
GTF2IRD1-203ENST00000455841 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
GTF2IRD1-203ENST00000455841 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
GTF2IRD1-203ENST00000455841 RANGAP1P46060 587 aaPredicted RBP24.39■■□□□ 1.5
GTF2IRD1-203ENST00000455841 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
GTF2IRD1-203ENST00000455841 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
GTF2IRD1-203ENST00000455841 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
GTF2IRD1-203ENST00000455841 UBTFP17480 764 aaKnown RBP24.27■■□□□ 1.48
GTF2IRD1-203ENST00000455841 ATAD2BQ9ULI0 1458 aa24.23■■□□□ 1.47
GTF2IRD1-203ENST00000455841 SOGA1O94964 1423 aa24.12■■□□□ 1.45
GTF2IRD1-203ENST00000455841 TRIM26Q12899 539 aaPredicted RBP24.04■■□□□ 1.44
GTF2IRD1-203ENST00000455841 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
GTF2IRD1-203ENST00000455841 CSRNP3Q8WYN3 585 aa24.01■■□□□ 1.43
GTF2IRD1-203ENST00000455841 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
GTF2IRD1-203ENST00000455841 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
GTF2IRD1-203ENST00000455841 HRCP23327 699 aa23.95■■□□□ 1.42
GTF2IRD1-203ENST00000455841 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
GTF2IRD1-203ENST00000455841 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
GTF2IRD1-203ENST00000455841 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
GTF2IRD1-203ENST00000455841 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
GTF2IRD1-203ENST00000455841 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
GTF2IRD1-203ENST00000455841 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
GTF2IRD1-203ENST00000455841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
GTF2IRD1-203ENST00000455841 APLP2Q06481 763 aa23.58■■□□□ 1.36
GTF2IRD1-203ENST00000455841 GOLGA3Q08378 1498 aa23.53■■□□□ 1.36
GTF2IRD1-203ENST00000455841 HMGXB3Q12766 1538 aa23.52■■□□□ 1.36
GTF2IRD1-203ENST00000455841 TNIKQ9UKE5 1360 aa23.51■■□□□ 1.35
GTF2IRD1-203ENST00000455841 EEA1Q15075 1411 aa23.5■■□□□ 1.35
GTF2IRD1-203ENST00000455841 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
GTF2IRD1-203ENST00000455841 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
GTF2IRD1-203ENST00000455841 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
GTF2IRD1-203ENST00000455841 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
GTF2IRD1-203ENST00000455841 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
GTF2IRD1-203ENST00000455841 NESP48681 1621 aa23.46■■□□□ 1.35
GTF2IRD1-203ENST00000455841 P3H3Q8IVL6 736 aa23.42■■□□□ 1.34
GTF2IRD1-203ENST00000455841 CLIP1P30622 1438 aa23.42■■□□□ 1.34
GTF2IRD1-203ENST00000455841 CFTRP13569 1480 aa23.42■■□□□ 1.34
GTF2IRD1-203ENST00000455841 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
GTF2IRD1-203ENST00000455841 CUX1P39880 1505 aa23.4■■□□□ 1.34
GTF2IRD1-203ENST00000455841 CUX2O14529 1486 aa23.34■■□□□ 1.33
GTF2IRD1-203ENST00000455841 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
GTF2IRD1-203ENST00000455841 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
GTF2IRD1-203ENST00000455841 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
GTF2IRD1-203ENST00000455841 ITGAEP38570 1179 aa23.26■■□□□ 1.31
GTF2IRD1-203ENST00000455841 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
GTF2IRD1-203ENST00000455841 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.3
GTF2IRD1-203ENST00000455841 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
GTF2IRD1-203ENST00000455841 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
GTF2IRD1-203ENST00000455841 BIVM-ERCC5R4GMW8 1640 aa23.12■■□□□ 1.29
GTF2IRD1-203ENST00000455841 KIF21BO75037 1637 aa23.1■■□□□ 1.29
GTF2IRD1-203ENST00000455841 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
GTF2IRD1-203ENST00000455841 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
GTF2IRD1-203ENST00000455841 IGF1RP08069 1367 aa23.08■■□□□ 1.29
GTF2IRD1-203ENST00000455841 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
GTF2IRD1-203ENST00000455841 ARID3CA6NKF2 412 aa23.03■■□□□ 1.28
GTF2IRD1-203ENST00000455841 PRXQ9BXM0 1461 aa23.03■■□□□ 1.28
GTF2IRD1-203ENST00000455841 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
GTF2IRD1-203ENST00000455841 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.27
GTF2IRD1-203ENST00000455841 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
GTF2IRD1-203ENST00000455841 PDS5BQ9NTI5 1447 aa22.93■■□□□ 1.26
GTF2IRD1-203ENST00000455841 FBLN2P98095 1184 aa22.92■■□□□ 1.26
GTF2IRD1-203ENST00000455841 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
GTF2IRD1-203ENST00000455841 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
GTF2IRD1-203ENST00000455841 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
GTF2IRD1-203ENST00000455841 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
GTF2IRD1-203ENST00000455841 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
GTF2IRD1-203ENST00000455841 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
GTF2IRD1-203ENST00000455841 FHOD3Q2V2M9 1422 aa22.8■■□□□ 1.24
GTF2IRD1-203ENST00000455841 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.231e-6■■■■■ 28.3
GTF2IRD1-203ENST00000455841 LAMC3Q9Y6N6 1575 aa22.75■■□□□ 1.23
GTF2IRD1-203ENST00000455841 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
GTF2IRD1-203ENST00000455841 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms