RNA–Protein interactions for RNA: ENST00000260210.4

BUD13-201, Transcript of BUD13 homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BUD13, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD13-201ENST00000260210 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
BUD13-201ENST00000260210 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
BUD13-201ENST00000260210 ZCCHC6Q5VYS8 1495 aaKnown RBP27.61■■■□□ 2.01
BUD13-201ENST00000260210 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
BUD13-201ENST00000260210 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
BUD13-201ENST00000260210 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
BUD13-201ENST00000260210 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
BUD13-201ENST00000260210 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.79
BUD13-201ENST00000260210 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
BUD13-201ENST00000260210 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
BUD13-201ENST00000260210 ABCC9O60706 1549 aa26.03■■□□□ 1.76
BUD13-201ENST00000260210 NACADO15069 1562 aa25.81■■□□□ 1.72
BUD13-201ENST00000260210 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
BUD13-201ENST00000260210 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
BUD13-201ENST00000260210 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
BUD13-201ENST00000260210 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
BUD13-201ENST00000260210 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
BUD13-201ENST00000260210 WIZO95785 1651 aa25.25■■□□□ 1.63
BUD13-201ENST00000260210 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
BUD13-201ENST00000260210 PCGF6Q9BYE7 350 aa25.15■■□□□ 1.62
BUD13-201ENST00000260210 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
BUD13-201ENST00000260210 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
BUD13-201ENST00000260210 HRCP23327 699 aa25.06■■□□□ 1.6
BUD13-201ENST00000260210 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
BUD13-201ENST00000260210 FAM9AQ8IZU1 332 aaPredicted RBP24.91■■□□□ 1.58
BUD13-201ENST00000260210 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
BUD13-201ENST00000260210 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
BUD13-201ENST00000260210 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
BUD13-201ENST00000260210 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
BUD13-201ENST00000260210 CCDC88BA6NC98 1476 aa24.72■■□□□ 1.55
BUD13-201ENST00000260210 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
BUD13-201ENST00000260210 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
BUD13-201ENST00000260210 EHMT2Q96KQ7 1210 aa24.67■■□□□ 1.54
BUD13-201ENST00000260210 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
BUD13-201ENST00000260210 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
BUD13-201ENST00000260210 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
BUD13-201ENST00000260210 SOGA1O94964 1423 aa24.31■■□□□ 1.48
BUD13-201ENST00000260210 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
BUD13-201ENST00000260210 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
BUD13-201ENST00000260210 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
BUD13-201ENST00000260210 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
BUD13-201ENST00000260210 EEA1Q15075 1411 aa24.17■■□□□ 1.46
BUD13-201ENST00000260210 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
BUD13-201ENST00000260210 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
BUD13-201ENST00000260210 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
BUD13-201ENST00000260210 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
BUD13-201ENST00000260210 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
BUD13-201ENST00000260210 GOLGA3Q08378 1498 aa23.99■■□□□ 1.43
BUD13-201ENST00000260210 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
BUD13-201ENST00000260210 KIF21BO75037 1637 aa23.89■■□□□ 1.41
BUD13-201ENST00000260210 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
BUD13-201ENST00000260210 HMGXB3Q12766 1538 aa23.88■■□□□ 1.41
BUD13-201ENST00000260210 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
BUD13-201ENST00000260210 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
BUD13-201ENST00000260210 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
BUD13-201ENST00000260210 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
BUD13-201ENST00000260210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
BUD13-201ENST00000260210 RAPGEF2Q9Y4G8 1499 aa23.74■■□□□ 1.39
BUD13-201ENST00000260210 CLIP1P30622 1438 aa23.7■■□□□ 1.38
BUD13-201ENST00000260210 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
BUD13-201ENST00000260210 CUX1P39880 1505 aa23.64■■□□□ 1.38
BUD13-201ENST00000260210 CFTRP13569 1480 aa23.64■■□□□ 1.37
BUD13-201ENST00000260210 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
BUD13-201ENST00000260210 PRXQ9BXM0 1461 aa23.55■■□□□ 1.36
BUD13-201ENST00000260210 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
BUD13-201ENST00000260210 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
BUD13-201ENST00000260210 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
BUD13-201ENST00000260210 KIF27Q86VH2 1401 aa23.46■■□□□ 1.35
BUD13-201ENST00000260210 APLP2Q06481 763 aa23.39■■□□□ 1.33
BUD13-201ENST00000260210 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
BUD13-201ENST00000260210 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
BUD13-201ENST00000260210 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
BUD13-201ENST00000260210 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
BUD13-201ENST00000260210 CUX2O14529 1486 aa23.27■■□□□ 1.32
BUD13-201ENST00000260210 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
BUD13-201ENST00000260210 IGF1RP08069 1367 aa23.23■■□□□ 1.31
BUD13-201ENST00000260210 ARHGAP35Q9NRY4 1499 aa23.2■■□□□ 1.3
BUD13-201ENST00000260210 KANK4Q5T7N3 995 aaPredicted RBP23.18■■□□□ 1.3
BUD13-201ENST00000260210 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
BUD13-201ENST00000260210 DIEXFQ68CQ4 756 aaKnown RBP23.13■■□□□ 1.29
BUD13-201ENST00000260210 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
BUD13-201ENST00000260210 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
BUD13-201ENST00000260210 NESP48681 1621 aa23.05■■□□□ 1.28
BUD13-201ENST00000260210 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
BUD13-201ENST00000260210 RRBP1Q9P2E9 1410 aaKnown RBP23.03■■□□□ 1.28
BUD13-201ENST00000260210 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
BUD13-201ENST00000260210 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
BUD13-201ENST00000260210 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
BUD13-201ENST00000260210 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
BUD13-201ENST00000260210 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
BUD13-201ENST00000260210 TIAM1Q13009 1591 aa22.93■■□□□ 1.26
BUD13-201ENST00000260210 DHX57Q6P158 1386 aaKnown RBP22.92■■□□□ 1.26
BUD13-201ENST00000260210 CCNB3Q8WWL7 1395 aa22.92■■□□□ 1.26
BUD13-201ENST00000260210 MAP3K1Q13233 1512 aa22.9■■□□□ 1.26
BUD13-201ENST00000260210 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
BUD13-201ENST00000260210 CLSPNQ9HAW4 1339 aa22.86■■□□□ 1.25
BUD13-201ENST00000260210 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
BUD13-201ENST00000260210 CUL7Q14999 1698 aa22.84■■□□□ 1.25
BUD13-201ENST00000260210 LRRC9Q6ZRR7 1453 aa22.83■■□□□ 1.24
BUD13-201ENST00000260210 FHAD1B1AJZ9 1412 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms