Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC140878.1-201ENST00000565277 250 ntBASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
TNFRSF1BP20333 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC012617.1-204ENST00000586340 2305 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC114501.2-201ENST00000439631 535 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC092337.1-201ENST00000568699 1129 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AL391069.4-201ENST00000609583 481 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC093028.1-201ENST00000622998 982 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AL590560.3-201ENST00000623350 461 ntBASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.01□□□□□ -0.17
TNFRSF1BP20333 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14□□□□□ -0.17
TNFRSF1BP20333 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms