RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-215ENST00000621534 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
PSMD13-215ENST00000621534 ABCC9O60706 1549 aa31.07■■■□□ 2.56
PSMD13-215ENST00000621534 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
PSMD13-215ENST00000621534 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
PSMD13-215ENST00000621534 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
PSMD13-215ENST00000621534 NACADO15069 1562 aa29.27■■■□□ 2.28
PSMD13-215ENST00000621534 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
PSMD13-215ENST00000621534 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
PSMD13-215ENST00000621534 DCAF1Q9Y4B6 1507 aa29.01■■■□□ 2.23
PSMD13-215ENST00000621534 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
PSMD13-215ENST00000621534 UNC13AQ9UPW8 1703 aa28.83■■■□□ 2.21
PSMD13-215ENST00000621534 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
PSMD13-215ENST00000621534 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
PSMD13-215ENST00000621534 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.14
PSMD13-215ENST00000621534 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
PSMD13-215ENST00000621534 CC2D2AQ9P2K1 1620 aa28.05■■■□□ 2.08
PSMD13-215ENST00000621534 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
PSMD13-215ENST00000621534 EIF4G1Q04637 1599 aaKnown RBP27.96■■■□□ 2.07
PSMD13-215ENST00000621534 MROH2BQ7Z745 1585 aa27.11■■□□□ 1.93
PSMD13-215ENST00000621534 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
PSMD13-215ENST00000621534 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
PSMD13-215ENST00000621534 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
PSMD13-215ENST00000621534 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
PSMD13-215ENST00000621534 NCAPD3P42695 1498 aa27.04■■□□□ 1.92
PSMD13-215ENST00000621534 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
PSMD13-215ENST00000621534 WIZO95785 1651 aa26.89■■□□□ 1.89
PSMD13-215ENST00000621534 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
PSMD13-215ENST00000621534 SMARCA2P51531 1590 aa26.86■■□□□ 1.89
PSMD13-215ENST00000621534 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
PSMD13-215ENST00000621534 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
PSMD13-215ENST00000621534 CUX2O14529 1486 aa26.78■■□□□ 1.88
PSMD13-215ENST00000621534 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
PSMD13-215ENST00000621534 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.86
PSMD13-215ENST00000621534 NESP48681 1621 aa26.67■■□□□ 1.86
PSMD13-215ENST00000621534 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
PSMD13-215ENST00000621534 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
PSMD13-215ENST00000621534 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
PSMD13-215ENST00000621534 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
PSMD13-215ENST00000621534 KIF21AQ7Z4S6 1674 aa26.3■■□□□ 1.8
PSMD13-215ENST00000621534 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
PSMD13-215ENST00000621534 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
PSMD13-215ENST00000621534 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
PSMD13-215ENST00000621534 WDR62O43379 1518 aa26.01■■□□□ 1.75
PSMD13-215ENST00000621534 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
PSMD13-215ENST00000621534 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
PSMD13-215ENST00000621534 CFTRP13569 1480 aa25.91■■□□□ 1.74
PSMD13-215ENST00000621534 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
PSMD13-215ENST00000621534 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
PSMD13-215ENST00000621534 PRDM2Q13029 1718 aa25.72■■□□□ 1.71
PSMD13-215ENST00000621534 TRIM41Q8WV44 630 aa25.7■■□□□ 1.71
PSMD13-215ENST00000621534 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
PSMD13-215ENST00000621534 OSCARQ8IYS5 282 aa25.56■■□□□ 1.68
PSMD13-215ENST00000621534 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
PSMD13-215ENST00000621534 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
PSMD13-215ENST00000621534 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
PSMD13-215ENST00000621534 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
PSMD13-215ENST00000621534 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
PSMD13-215ENST00000621534 CUX1P39880 1505 aa25.38■■□□□ 1.65
PSMD13-215ENST00000621534 TOP2BQ02880 1626 aa25.36■■□□□ 1.65
PSMD13-215ENST00000621534 BIVM-ERCC5R4GMW8 1640 aa25.36■■□□□ 1.65
PSMD13-215ENST00000621534 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
PSMD13-215ENST00000621534 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
PSMD13-215ENST00000621534 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
PSMD13-215ENST00000621534 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
PSMD13-215ENST00000621534 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
PSMD13-215ENST00000621534 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
PSMD13-215ENST00000621534 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.622e-6■■■■□ 24.1
PSMD13-215ENST00000621534 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
PSMD13-215ENST00000621534 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
PSMD13-215ENST00000621534 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
PSMD13-215ENST00000621534 SOGA1O94964 1423 aa25.1■■□□□ 1.61
PSMD13-215ENST00000621534 CHD1O14646 1710 aa25.09■■□□□ 1.61
PSMD13-215ENST00000621534 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
PSMD13-215ENST00000621534 FBLN2P98095 1184 aa25.06■■□□□ 1.6
PSMD13-215ENST00000621534 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
PSMD13-215ENST00000621534 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
PSMD13-215ENST00000621534 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
PSMD13-215ENST00000621534 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
PSMD13-215ENST00000621534 EEA1Q15075 1411 aa24.94■■□□□ 1.58
PSMD13-215ENST00000621534 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
PSMD13-215ENST00000621534 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
PSMD13-215ENST00000621534 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
PSMD13-215ENST00000621534 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
PSMD13-215ENST00000621534 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
PSMD13-215ENST00000621534 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
PSMD13-215ENST00000621534 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
PSMD13-215ENST00000621534 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
PSMD13-215ENST00000621534 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
PSMD13-215ENST00000621534 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
PSMD13-215ENST00000621534 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
PSMD13-215ENST00000621534 SYNJ2O15056 1496 aa24.77■■□□□ 1.56
PSMD13-215ENST00000621534 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
PSMD13-215ENST00000621534 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
PSMD13-215ENST00000621534 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
PSMD13-215ENST00000621534 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
PSMD13-215ENST00000621534 KIF21BO75037 1637 aa24.7■■□□□ 1.54
PSMD13-215ENST00000621534 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
PSMD13-215ENST00000621534 IGF1RP08069 1367 aa24.67■■□□□ 1.54
PSMD13-215ENST00000621534 PRXQ9BXM0 1461 aa24.65■■□□□ 1.54
PSMD13-215ENST00000621534 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms