RNA–Protein interactions for RNA: ENST00000355153.8

ITGB2-203, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ITGB2, Length 2,913 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-203ENST00000355153 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
ITGB2-203ENST00000355153 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
ITGB2-203ENST00000355153 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
ITGB2-203ENST00000355153 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
ITGB2-203ENST00000355153 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.61
ITGB2-203ENST00000355153 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
ITGB2-203ENST00000355153 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
ITGB2-203ENST00000355153 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
ITGB2-203ENST00000355153 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
ITGB2-203ENST00000355153 HRCP23327 699 aa23.95■■□□□ 1.42
ITGB2-203ENST00000355153 PCGF6Q9BYE7 350 aa23.9■■□□□ 1.42
ITGB2-203ENST00000355153 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
ITGB2-203ENST00000355153 ABCC9O60706 1549 aa23.8■■□□□ 1.4
ITGB2-203ENST00000355153 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
ITGB2-203ENST00000355153 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
ITGB2-203ENST00000355153 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
ITGB2-203ENST00000355153 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
ITGB2-203ENST00000355153 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
ITGB2-203ENST00000355153 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
ITGB2-203ENST00000355153 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
ITGB2-203ENST00000355153 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
ITGB2-203ENST00000355153 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
ITGB2-203ENST00000355153 NACADO15069 1562 aa23.2■■□□□ 1.31
ITGB2-203ENST00000355153 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
ITGB2-203ENST00000355153 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
ITGB2-203ENST00000355153 WIZO95785 1651 aa23.09■■□□□ 1.29
ITGB2-203ENST00000355153 MYT1Q01538 1121 aa22.89■■□□□ 1.25
ITGB2-203ENST00000355153 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
ITGB2-203ENST00000355153 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
ITGB2-203ENST00000355153 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
ITGB2-203ENST00000355153 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
ITGB2-203ENST00000355153 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
ITGB2-203ENST00000355153 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
ITGB2-203ENST00000355153 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
ITGB2-203ENST00000355153 SCAF1Q9H7N4 1312 aaKnown RBP22.6■■□□□ 1.21
ITGB2-203ENST00000355153 CCDC88BA6NC98 1476 aa22.58■■□□□ 1.21
ITGB2-203ENST00000355153 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
ITGB2-203ENST00000355153 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
ITGB2-203ENST00000355153 SOGA1O94964 1423 aa22.43■■□□□ 1.18
ITGB2-203ENST00000355153 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
ITGB2-203ENST00000355153 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
ITGB2-203ENST00000355153 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
ITGB2-203ENST00000355153 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
ITGB2-203ENST00000355153 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
ITGB2-203ENST00000355153 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
ITGB2-203ENST00000355153 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
ITGB2-203ENST00000355153 TNIKQ9UKE5 1360 aa22.26■■□□□ 1.15
ITGB2-203ENST00000355153 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
ITGB2-203ENST00000355153 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
ITGB2-203ENST00000355153 EEA1Q15075 1411 aa22.19■■□□□ 1.14
ITGB2-203ENST00000355153 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
ITGB2-203ENST00000355153 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
ITGB2-203ENST00000355153 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
ITGB2-203ENST00000355153 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
ITGB2-203ENST00000355153 DIEXFQ68CQ4 756 aaKnown RBP21.99■■□□□ 1.11
ITGB2-203ENST00000355153 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
ITGB2-203ENST00000355153 KIF21BO75037 1637 aa21.96■■□□□ 1.11
ITGB2-203ENST00000355153 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
ITGB2-203ENST00000355153 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
ITGB2-203ENST00000355153 CLIP1P30622 1438 aa21.91■■□□□ 1.1
ITGB2-203ENST00000355153 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
ITGB2-203ENST00000355153 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
ITGB2-203ENST00000355153 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
ITGB2-203ENST00000355153 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
ITGB2-203ENST00000355153 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
ITGB2-203ENST00000355153 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
ITGB2-203ENST00000355153 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
ITGB2-203ENST00000355153 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
ITGB2-203ENST00000355153 APLP2Q06481 763 aa21.69■■□□□ 1.06
ITGB2-203ENST00000355153 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
ITGB2-203ENST00000355153 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
ITGB2-203ENST00000355153 PRXQ9BXM0 1461 aa21.58■■□□□ 1.04
ITGB2-203ENST00000355153 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
ITGB2-203ENST00000355153 ARAP1Q96P48 1450 aa21.56■■□□□ 1.04
ITGB2-203ENST00000355153 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
ITGB2-203ENST00000355153 CUX1P39880 1505 aa21.55■■□□□ 1.04
ITGB2-203ENST00000355153 MIER1Q8N108 512 aa21.54■■□□□ 1.04
ITGB2-203ENST00000355153 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
ITGB2-203ENST00000355153 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
ITGB2-203ENST00000355153 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
ITGB2-203ENST00000355153 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
ITGB2-203ENST00000355153 DHX57Q6P158 1386 aaKnown RBP21.41■■□□□ 1.02
ITGB2-203ENST00000355153 CFTRP13569 1480 aa21.39■■□□□ 1.01
ITGB2-203ENST00000355153 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
ITGB2-203ENST00000355153 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
ITGB2-203ENST00000355153 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
ITGB2-203ENST00000355153 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
ITGB2-203ENST00000355153 ITGAEP38570 1179 aa21.25■□□□□ 0.99
ITGB2-203ENST00000355153 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
ITGB2-203ENST00000355153 CUX2O14529 1486 aa21.25■□□□□ 0.99
ITGB2-203ENST00000355153 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
ITGB2-203ENST00000355153 IGF1RP08069 1367 aa21.2■□□□□ 0.98
ITGB2-203ENST00000355153 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.98
ITGB2-203ENST00000355153 TIAM1Q13009 1591 aa21.13■□□□□ 0.97
ITGB2-203ENST00000355153 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
ITGB2-203ENST00000355153 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
ITGB2-203ENST00000355153 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
ITGB2-203ENST00000355153 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
ITGB2-203ENST00000355153 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
ITGB2-203ENST00000355153 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms