RNA–Protein interactions for RNA: ENST00000052569.10

GOPC-201, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOPC, Length 4,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-201ENST00000052569 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
GOPC-201ENST00000052569 NISCHQ9Y2I1 1504 aa24.49■■□□□ 1.51
GOPC-201ENST00000052569 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
GOPC-201ENST00000052569 SHROOM4Q9ULL8 1493 aa24.02■■□□□ 1.44
GOPC-201ENST00000052569 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
GOPC-201ENST00000052569 FAM9AQ8IZU1 332 aaPredicted RBP23.08■■□□□ 1.29
GOPC-201ENST00000052569 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
GOPC-201ENST00000052569 TTBK1Q5TCY1 1321 aaPredicted RBP22.87■■□□□ 1.25
GOPC-201ENST00000052569 APLP2Q06481 763 aa22.76■■□□□ 1.23
GOPC-201ENST00000052569 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
GOPC-201ENST00000052569 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
GOPC-201ENST00000052569 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
GOPC-201ENST00000052569 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
GOPC-201ENST00000052569 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
GOPC-201ENST00000052569 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
GOPC-201ENST00000052569 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
GOPC-201ENST00000052569 UBTFP17480 764 aaKnown RBP22.18■■□□□ 1.14
GOPC-201ENST00000052569 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.12
GOPC-201ENST00000052569 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
GOPC-201ENST00000052569 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
GOPC-201ENST00000052569 HRCP23327 699 aa21.9■■□□□ 1.1
GOPC-201ENST00000052569 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
GOPC-201ENST00000052569 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
GOPC-201ENST00000052569 ERICH6Q7L0X2 663 aa21.74■■□□□ 1.07
GOPC-201ENST00000052569 NEFLP07196 543 aa21.61■■□□□ 1.05
GOPC-201ENST00000052569 ITGAEP38570 1179 aa21.58■■□□□ 1.04
GOPC-201ENST00000052569 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
GOPC-201ENST00000052569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
GOPC-201ENST00000052569 POLR3GLQ9BT43 218 aa21.25■□□□□ 0.99
GOPC-201ENST00000052569 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
GOPC-201ENST00000052569 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
GOPC-201ENST00000052569 MYT1Q01538 1121 aa21.13■□□□□ 0.97
GOPC-201ENST00000052569 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
GOPC-201ENST00000052569 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
GOPC-201ENST00000052569 FAM50AQ14320 339 aaKnown RBP20.92■□□□□ 0.94
GOPC-201ENST00000052569 ABCC9O60706 1549 aa20.9■□□□□ 0.94
GOPC-201ENST00000052569 GTF3C3Q9Y5Q9 886 aa20.86■□□□□ 0.93
GOPC-201ENST00000052569 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
GOPC-201ENST00000052569 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
GOPC-201ENST00000052569 BCANQ96GW7 911 aa20.77■□□□□ 0.92
GOPC-201ENST00000052569 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
GOPC-201ENST00000052569 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
GOPC-201ENST00000052569 SLC4A1APQ9BWU0 796 aaKnown RBP20.63■□□□□ 0.89
GOPC-201ENST00000052569 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
GOPC-201ENST00000052569 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
GOPC-201ENST00000052569 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
GOPC-201ENST00000052569 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
GOPC-201ENST00000052569 ANP32CO43423 234 aa20.53■□□□□ 0.88
GOPC-201ENST00000052569 CLSPNQ9HAW4 1339 aa20.52■□□□□ 0.87
GOPC-201ENST00000052569 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
GOPC-201ENST00000052569 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
GOPC-201ENST00000052569 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
GOPC-201ENST00000052569 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
GOPC-201ENST00000052569 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
GOPC-201ENST00000052569 FBLN2P98095 1184 aa20.37■□□□□ 0.85
GOPC-201ENST00000052569 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.84
GOPC-201ENST00000052569 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
GOPC-201ENST00000052569 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
GOPC-201ENST00000052569 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
GOPC-201ENST00000052569 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
GOPC-201ENST00000052569 FKBP8Q14318 412 aa20.15■□□□□ 0.82
GOPC-201ENST00000052569 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
GOPC-201ENST00000052569 HNRNPUQ00839 825 aaKnown RBP eCLIP20.07■□□□□ 0.8
GOPC-201ENST00000052569 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
GOPC-201ENST00000052569 MIER1Q8N108 512 aa20.03■□□□□ 0.8
GOPC-201ENST00000052569 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
GOPC-201ENST00000052569 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
GOPC-201ENST00000052569 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
GOPC-201ENST00000052569 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
GOPC-201ENST00000052569 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
GOPC-201ENST00000052569 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
GOPC-201ENST00000052569 ANP32AP39687 249 aaKnown RBP19.95■□□□□ 0.78
GOPC-201ENST00000052569 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
GOPC-201ENST00000052569 SLC24A1O60721 1099 aa19.87■□□□□ 0.77
GOPC-201ENST00000052569 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
GOPC-201ENST00000052569 CLIP1P30622 1438 aa19.83■□□□□ 0.77
GOPC-201ENST00000052569 IRX6P78412 446 aaPredicted RBP19.83■□□□□ 0.76
GOPC-201ENST00000052569 NEFMP07197 916 aa19.8■□□□□ 0.76
GOPC-201ENST00000052569 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
GOPC-201ENST00000052569 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
GOPC-201ENST00000052569 TMC1Q8TDI8 760 aa19.78■□□□□ 0.76
GOPC-201ENST00000052569 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
GOPC-201ENST00000052569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.754e-8■■■■□ 21.9
GOPC-201ENST00000052569 CCDC136Q96JN2 1154 aa19.75■□□□□ 0.75
GOPC-201ENST00000052569 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
GOPC-201ENST00000052569 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
GOPC-201ENST00000052569 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
GOPC-201ENST00000052569 RRP7BPQ9NSQ0 103 aa19.71■□□□□ 0.75
GOPC-201ENST00000052569 SENP3-EIF4A1A0A087X0R7 540 aa19.67■□□□□ 0.74
GOPC-201ENST00000052569 NBR1Q14596 966 aa19.66■□□□□ 0.74
GOPC-201ENST00000052569 TSPY4P0CV99 314 aa19.63■□□□□ 0.73
GOPC-201ENST00000052569 TSPY10P0CW01 314 aa19.63■□□□□ 0.73
GOPC-201ENST00000052569 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.736e-6■■■■□ 25.1
GOPC-201ENST00000052569 EIF5BO60841 1220 aaKnown RBP19.57■□□□□ 0.72
GOPC-201ENST00000052569 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
GOPC-201ENST00000052569 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
GOPC-201ENST00000052569 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
GOPC-201ENST00000052569 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
GOPC-201ENST00000052569 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
GOPC-201ENST00000052569 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms