RNA–Protein interactions for RNA: ENST00000219596.5

MEFV-201, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MEFV, Length 3,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-201ENST00000219596 NISCHQ9Y2I1 1504 aa27.15■■□□□ 1.94
MEFV-201ENST00000219596 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
MEFV-201ENST00000219596 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
MEFV-201ENST00000219596 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
MEFV-201ENST00000219596 PCGF6Q9BYE7 350 aa23.87■■□□□ 1.41
MEFV-201ENST00000219596 PPARGC1BQ86YN6 1023 aaKnown RBP23.79■■□□□ 1.4
MEFV-201ENST00000219596 HRCP23327 699 aa23.73■■□□□ 1.39
MEFV-201ENST00000219596 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
MEFV-201ENST00000219596 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
MEFV-201ENST00000219596 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
MEFV-201ENST00000219596 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
MEFV-201ENST00000219596 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
MEFV-201ENST00000219596 ABCC9O60706 1549 aa23.09■■□□□ 1.29
MEFV-201ENST00000219596 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
MEFV-201ENST00000219596 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
MEFV-201ENST00000219596 TTBK1Q5TCY1 1321 aaPredicted RBP22.67■■□□□ 1.22
MEFV-201ENST00000219596 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
MEFV-201ENST00000219596 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
MEFV-201ENST00000219596 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
MEFV-201ENST00000219596 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
MEFV-201ENST00000219596 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
MEFV-201ENST00000219596 CCER1Q8TC90 406 aaPredicted RBP22.22■■□□□ 1.15
MEFV-201ENST00000219596 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
MEFV-201ENST00000219596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
MEFV-201ENST00000219596 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
MEFV-201ENST00000219596 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
MEFV-201ENST00000219596 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
MEFV-201ENST00000219596 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
MEFV-201ENST00000219596 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
MEFV-201ENST00000219596 RB1CC1Q8TDY2 1594 aa21.94■■□□□ 1.1
MEFV-201ENST00000219596 NACADO15069 1562 aa21.91■■□□□ 1.1
MEFV-201ENST00000219596 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
MEFV-201ENST00000219596 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
MEFV-201ENST00000219596 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
MEFV-201ENST00000219596 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
MEFV-201ENST00000219596 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
MEFV-201ENST00000219596 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
MEFV-201ENST00000219596 CECR2Q9BXF3 1484 aa21.55■■□□□ 1.04
MEFV-201ENST00000219596 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
MEFV-201ENST00000219596 MYT1Q01538 1121 aa21.54■■□□□ 1.04
MEFV-201ENST00000219596 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
MEFV-201ENST00000219596 MIER1Q8N108 512 aa21.29■■□□□ 1
MEFV-201ENST00000219596 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
MEFV-201ENST00000219596 ZNF316A6NFI3 1004 aaPredicted RBP21.27■□□□□ 0.99
MEFV-201ENST00000219596 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
MEFV-201ENST00000219596 APLP2Q06481 763 aa21.25■□□□□ 0.99
MEFV-201ENST00000219596 BCANQ96GW7 911 aa21.11■□□□□ 0.97
MEFV-201ENST00000219596 ITGAEP38570 1179 aa21.1■□□□□ 0.97
MEFV-201ENST00000219596 WIZO95785 1651 aa21.1■□□□□ 0.97
MEFV-201ENST00000219596 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
MEFV-201ENST00000219596 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
MEFV-201ENST00000219596 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
MEFV-201ENST00000219596 SOGA1O94964 1423 aa20.88■□□□□ 0.93
MEFV-201ENST00000219596 BAZ1AQ9NRL2 1556 aaPredicted RBP20.88■□□□□ 0.93
MEFV-201ENST00000219596 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
MEFV-201ENST00000219596 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
MEFV-201ENST00000219596 SUPT16HQ9Y5B9 1047 aaKnown RBP20.8■□□□□ 0.92
MEFV-201ENST00000219596 EIF4G1Q04637 1599 aaKnown RBP20.75■□□□□ 0.91
MEFV-201ENST00000219596 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
MEFV-201ENST00000219596 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
MEFV-201ENST00000219596 BCL11AQ9H165 835 aa20.67■□□□□ 0.9
MEFV-201ENST00000219596 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
MEFV-201ENST00000219596 WRNQ14191 1432 aaPredicted RBP eCLIP20.64■□□□□ 0.9
MEFV-201ENST00000219596 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.9
MEFV-201ENST00000219596 CC2D2AQ9P2K1 1620 aa20.63■□□□□ 0.89
MEFV-201ENST00000219596 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
MEFV-201ENST00000219596 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
MEFV-201ENST00000219596 NEFLP07196 543 aa20.59■□□□□ 0.89
MEFV-201ENST00000219596 FKBP8Q14318 412 aa20.59■□□□□ 0.89
MEFV-201ENST00000219596 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
MEFV-201ENST00000219596 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
MEFV-201ENST00000219596 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
MEFV-201ENST00000219596 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
MEFV-201ENST00000219596 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
MEFV-201ENST00000219596 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
MEFV-201ENST00000219596 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
MEFV-201ENST00000219596 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
MEFV-201ENST00000219596 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
MEFV-201ENST00000219596 CLIP1P30622 1438 aa20.49■□□□□ 0.87
MEFV-201ENST00000219596 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
MEFV-201ENST00000219596 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
MEFV-201ENST00000219596 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
MEFV-201ENST00000219596 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
MEFV-201ENST00000219596 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
MEFV-201ENST00000219596 EEA1Q15075 1411 aa20.37■□□□□ 0.85
MEFV-201ENST00000219596 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
MEFV-201ENST00000219596 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
MEFV-201ENST00000219596 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
MEFV-201ENST00000219596 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
MEFV-201ENST00000219596 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
MEFV-201ENST00000219596 SIN3AQ96ST3 1273 aa20.24■□□□□ 0.83
MEFV-201ENST00000219596 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
MEFV-201ENST00000219596 SENP3-EIF4A1A0A087X0R7 540 aa20.2■□□□□ 0.82
MEFV-201ENST00000219596 ANP32CO43423 234 aa20.17■□□□□ 0.82
MEFV-201ENST00000219596 ARID3CA6NKF2 412 aa20.16■□□□□ 0.82
MEFV-201ENST00000219596 POLR3GLQ9BT43 218 aa20.16■□□□□ 0.82
MEFV-201ENST00000219596 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
MEFV-201ENST00000219596 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
MEFV-201ENST00000219596 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
MEFV-201ENST00000219596 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms