RNA–Protein interactions for RNA: ENST00000310018.6

ATP6V0A4-201, Transcript of ATPase H+ transporting V0 subunit a4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V0A4, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4-201ENST00000310018 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
ATP6V0A4-201ENST00000310018 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
ATP6V0A4-201ENST00000310018 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
ATP6V0A4-201ENST00000310018 DCAF8L2P0C7V8 631 aa25.75■■□□□ 1.71
ATP6V0A4-201ENST00000310018 SHROOM4Q9ULL8 1493 aa25.68■■□□□ 1.7
ATP6V0A4-201ENST00000310018 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
ATP6V0A4-201ENST00000310018 ABCC9O60706 1549 aa25.48■■□□□ 1.67
ATP6V0A4-201ENST00000310018 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
ATP6V0A4-201ENST00000310018 NACADO15069 1562 aa24.99■■□□□ 1.59
ATP6V0A4-201ENST00000310018 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
ATP6V0A4-201ENST00000310018 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
ATP6V0A4-201ENST00000310018 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
ATP6V0A4-201ENST00000310018 HRCP23327 699 aa24.69■■□□□ 1.54
ATP6V0A4-201ENST00000310018 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
ATP6V0A4-201ENST00000310018 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
ATP6V0A4-201ENST00000310018 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.51
ATP6V0A4-201ENST00000310018 PCGF6Q9BYE7 350 aa24.25■■□□□ 1.47
ATP6V0A4-201ENST00000310018 CECR2Q9BXF3 1484 aa24.23■■□□□ 1.47
ATP6V0A4-201ENST00000310018 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
ATP6V0A4-201ENST00000310018 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.46
ATP6V0A4-201ENST00000310018 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
ATP6V0A4-201ENST00000310018 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
ATP6V0A4-201ENST00000310018 WIZO95785 1651 aa23.92■■□□□ 1.42
ATP6V0A4-201ENST00000310018 BAZ1AQ9NRL2 1556 aaPredicted RBP23.9■■□□□ 1.42
ATP6V0A4-201ENST00000310018 SCAF1Q9H7N4 1312 aaKnown RBP23.87■■□□□ 1.41
ATP6V0A4-201ENST00000310018 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
ATP6V0A4-201ENST00000310018 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
ATP6V0A4-201ENST00000310018 MYT1Q01538 1121 aa23.68■■□□□ 1.38
ATP6V0A4-201ENST00000310018 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
ATP6V0A4-201ENST00000310018 PEG3Q9GZU2 1588 aa23.45■■□□□ 1.34
ATP6V0A4-201ENST00000310018 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.33
ATP6V0A4-201ENST00000310018 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
ATP6V0A4-201ENST00000310018 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
ATP6V0A4-201ENST00000310018 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
ATP6V0A4-201ENST00000310018 BAZ1BQ9UIG0 1483 aaKnown RBP23.26■■□□□ 1.31
ATP6V0A4-201ENST00000310018 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
ATP6V0A4-201ENST00000310018 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
ATP6V0A4-201ENST00000310018 HMGXB3Q12766 1538 aa23.06■■□□□ 1.28
ATP6V0A4-201ENST00000310018 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
ATP6V0A4-201ENST00000310018 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
ATP6V0A4-201ENST00000310018 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
ATP6V0A4-201ENST00000310018 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
ATP6V0A4-201ENST00000310018 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
ATP6V0A4-201ENST00000310018 LOC105371045A0A1W2PR82 267 aa22.95■■□□□ 1.26
ATP6V0A4-201ENST00000310018 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
ATP6V0A4-201ENST00000310018 FAM9AQ8IZU1 332 aaPredicted RBP22.88■■□□□ 1.25
ATP6V0A4-201ENST00000310018 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
ATP6V0A4-201ENST00000310018 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
ATP6V0A4-201ENST00000310018 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
ATP6V0A4-201ENST00000310018 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
ATP6V0A4-201ENST00000310018 CFTRP13569 1480 aa22.66■■□□□ 1.22
ATP6V0A4-201ENST00000310018 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
ATP6V0A4-201ENST00000310018 SOGA1O94964 1423 aa22.61■■□□□ 1.21
ATP6V0A4-201ENST00000310018 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
ATP6V0A4-201ENST00000310018 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
ATP6V0A4-201ENST00000310018 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
ATP6V0A4-201ENST00000310018 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
ATP6V0A4-201ENST00000310018 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
ATP6V0A4-201ENST00000310018 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
ATP6V0A4-201ENST00000310018 YTHDC1Q96MU7 727 aaKnown RBP22.5■■□□□ 1.19
ATP6V0A4-201ENST00000310018 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
ATP6V0A4-201ENST00000310018 CUX1P39880 1505 aa22.48■■□□□ 1.19
ATP6V0A4-201ENST00000310018 NESP48681 1621 aa22.47■■□□□ 1.19
ATP6V0A4-201ENST00000310018 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
ATP6V0A4-201ENST00000310018 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
ATP6V0A4-201ENST00000310018 EEA1Q15075 1411 aa22.35■■□□□ 1.17
ATP6V0A4-201ENST00000310018 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
ATP6V0A4-201ENST00000310018 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
ATP6V0A4-201ENST00000310018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
ATP6V0A4-201ENST00000310018 TTBK1Q5TCY1 1321 aaPredicted RBP22.24■■□□□ 1.15
ATP6V0A4-201ENST00000310018 FGD5Q6ZNL6 1462 aa22.18■■□□□ 1.14
ATP6V0A4-201ENST00000310018 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
ATP6V0A4-201ENST00000310018 GOLGA3Q08378 1498 aa22.16■■□□□ 1.14
ATP6V0A4-201ENST00000310018 KIF21BO75037 1637 aa22.16■■□□□ 1.14
ATP6V0A4-201ENST00000310018 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
ATP6V0A4-201ENST00000310018 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
ATP6V0A4-201ENST00000310018 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
ATP6V0A4-201ENST00000310018 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
ATP6V0A4-201ENST00000310018 TOPBP1Q92547 1522 aa22.12■■□□□ 1.13
ATP6V0A4-201ENST00000310018 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
ATP6V0A4-201ENST00000310018 RAPGEF2Q9Y4G8 1499 aa22.11■■□□□ 1.13
ATP6V0A4-201ENST00000310018 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
ATP6V0A4-201ENST00000310018 PRKCSHP14314 528 aaPredicted RBP22.09■■□□□ 1.13
ATP6V0A4-201ENST00000310018 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
ATP6V0A4-201ENST00000310018 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
ATP6V0A4-201ENST00000310018 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
ATP6V0A4-201ENST00000310018 CUX2O14529 1486 aa22.07■■□□□ 1.12
ATP6V0A4-201ENST00000310018 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
ATP6V0A4-201ENST00000310018 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
ATP6V0A4-201ENST00000310018 ANP32EQ9BTT0 268 aa22.02■■□□□ 1.11
ATP6V0A4-201ENST00000310018 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
ATP6V0A4-201ENST00000310018 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
ATP6V0A4-201ENST00000310018 IGF1RP08069 1367 aa21.94■■□□□ 1.1
ATP6V0A4-201ENST00000310018 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
ATP6V0A4-201ENST00000310018 RANGAP1P46060 587 aaPredicted RBP21.91■■□□□ 1.1
ATP6V0A4-201ENST00000310018 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
ATP6V0A4-201ENST00000310018 CLIP1P30622 1438 aa21.85■■□□□ 1.09
ATP6V0A4-201ENST00000310018 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
ATP6V0A4-201ENST00000310018 CARMIL1Q5VZK9 1371 aa21.81■■□□□ 1.08
ATP6V0A4-201ENST00000310018 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms